KEGG   Taeniopygia guttata (zebra finch): 100219524
Entry
100219524         CDS       T01082                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100219524 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgu03021]
    100219524 (AFF4)
Transcription machinery [BR:tgu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     100219524 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 100219524
NCBI-ProteinID: XP_012430498
Ensembl: ENSTGUG00000000187
UniProt: A0A674GNB8
Position
13:complement(17334141..17380880)
AA seq 1161 aa
MNREDRNVLRMKERERRNQEIQQGDEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMTDLIGDRPLQKIVAIPKPSVPTAPDDKPTPGFFGEQRHGAGSHQSSKWTPVGPAPSTS
AQSQKRSAGPGAHGQRSGGGAAGAGARHERDSYGGRKKGQHGSEHSKGRSGSPGKPPAVS
SLASGHSRAHGGDHHGKDHQRSKSPRDPEPSWDSPSRVPSFASGQHSTQSFPPSLMSKSS
SMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHGGGVNELKPSSKAHLTKLKIPSQPLDA
SASGEVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRYNP
SSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHNSE
GADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLN
KVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYADQGGSKDSISSTPGRDSKPTQKG
SESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPSN
RHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESL
PPSSQTPKYSESNRTPVKSSMEEDDSFFRQRMFSPMEEKELLSPLSDPDERYPLIVKIDL
SLLSRIPGKPYKDAEGAKAEKKSASEKHAREAQKQPSDKSSTKGKRKHKQNEDENRASES
KKTKLEEKAPSGHKNSSSRESSKPSAVKEKDLLPSPAAPALQKDSKQEHSSRKRTVSQSS
SLKSSSNPGKESSSGSKSSSSSKQKKTEGKGSSSAKEAKEKILNNSSSCPPTSAQATESA
KSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKN
AQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLKKE
SALKYSKTLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGS
GSSVTIPQRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKVMGPLVFNTS
IMTELVRYTRQGLHWLRLDAK
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgtatgaaagaaagggaaaggcgaaatcaagaa
attcagcagggtgacgaagccttcccacccaactctcctctctttgctgaaccgtacaaa
gtgaccagcaaagaagacaagctgtcgagccgcatccagagcatgctcggtaactatgat
gagatgacggatctcatcggggaccggccgctccagaagatcgtcgccatccccaagccc
tcggttcccacggcgcccgatgacaaacccacgcccggcttcttcggcgagcagcggcac
ggcgcgggctctcaccagagcagcaaatggaccccggtggggccggcccccagcacctcg
gcccagtcccagaagcgctcggcggggccgggggcccacgggcagcgctccgggggcggc
gcggccggcgccggggcccggcacgagcgcgactcctacggcggccgcaagaagggccag
cacggctcggagcactccaagggccgctccggcagccccgggaagccgccggccgtgtcc
tcgctagcctctggccactccagagcccacggcggcgaccaccacggcaaggaccaccag
cgctccaaatcgccccgggaccccgagcccagctgggactctccctcccgcgtgccctcg
ttcgccagtgggcagcactcgacccagtccttcccaccctcgctgatgtccaagtccagt
tcaatgttacagaaacccactgcctacgtcaggccgatggatgggcaggagtccatggag
ccaaagctatcctcggaacactacagcagccagagccacggcggcggcgtcaacgagctg
aaacccagcagcaaagcgcacctgaccaagctgaaaattccttctcagccactggatgca
tcagcctctggtgaggtgagctgcgtggatgaaatcctcaaagagatgacccactcctgg
cctcctccactgactgccatccacaccccctgcaaaactgaaccctccaaattccccttt
ccaacaaaggagtctcagcagtccagttttggcactggagaacagaaacgatacaatccc
tcctccaaaacatccaatggtcatcaatccaaatcatgtgaatcgaaccagacagatatg
ttgaaagatgacttaaaacttagcagtagtgaagacagcgatggagagcaggactgtgat
aagaccgtgccaaggagcacacctggaagtaattctgagccttcccagcacaacagtgaa
ggagcagacaactccagggatgactcgagcagccacagcggctccgagagcagctccggc
tccgactcggagagcgagagcagctccagtgacagcgaggccaacgagccatcccagagt
gcatcccccgagccagagccaccacccacaaacaagtggcagctggataactggttgaac
aaagtcaattcccataaagtgtcaccagcttcttccgtggacagcaatatcccttcttcc
caaggctacaagaaagagggacgagatcagggtacagggagtgggtacgctgatcaaggt
ggatccaaggattccatctcttctacaccagggagagattccaaacccacccagaagggc
tcggagagcagtcgtgggaggcagaaatcacctgcccagagcgacagctcgacccaaagg
aggactgtagggaaaaaacagcccaagaaagcagaaaagacatctgtggaagagcccaga
ggaggtcttaaaatagaaagtgaaaccccagtagacatggcaacaaatatcccttcaaac
aggcacaaggcagccaccaaaggctccaggaaacccaatataaaaaaggagcccaagtct
tcccctcgacctacaacagagaaaaagaaatacaaggcttcaagcaaatctgcccagaaa
tccagggaattcatcgaaacagatacctcatcctctgattcagatgaaaatgagagtctg
cctccttcctcacaaacacccaaatactctgagagcaataggactcctgttaaatcttcc
atggaggaggatgacagcttttttcggcaaagaatgttctctcctatggaagagaaagag
cttctgtccccactgagtgatcctgatgaaaggtacccactcattgtgaagattgacctg
agcctcttatccaggataccagggaagccttacaaggacgccgagggagccaaggcggag
aagaagagcgcttcggagaaacacgcccgcgaggcccagaaacagccctcggacaagagc
tccaccaaaggcaagaggaaacacaaacagaacgaggatgaaaacagagccagtgaaagc
aagaaaacgaaactggaagaaaaagctccctcaggacacaagaattccagcagcagggag
tcttcaaagccaagtgctgttaaagagaaggatttgctgccctcccctgctgccccagcc
ctgcagaaggattccaagcaggaacacagctccaggaagagaacagtcagtcagtcctca
tccctaaaatccagcagcaacccaggcaaggagagcagcagtggcagcaagagcagctcc
tcctccaagcagaagaagacagaggggaagggctccagcagtgccaaggaagccaaggaa
aagatcctgaacaattcctccagctgccctcccacctctgctcaggccacggaaagtgcg
aagtcgaggagagcaaagctcgtttttgatgataggacttactcagctgaccattatttg
caggaagcaaagaagctgaaacacaatgcagatgctttgtcggacaggttcgagaaggcc
gtgtactacctggatgctgtcgtgtccttcattgagtgtgggaatgcattggagaaaaat
gctcaggaatccaagtccccgttccctatgtattcagaaactgtggaattaatcaaatac
actatgaaactgaagaattacttggccccggatgcgacagctgcagacaaaaggctggca
gtgctttgccttcggtgccaagctctgctctacctgaggcttttcaaactgaaaaaggaa
agtgcattgaaatactcaaaaactctgactgaacatctgaagaattgctacaataattct
caagcaccatcccctggtatgggaagcaaacctgtcgggatgccatctccagtctctcca
aagctgtctccggggaattcaggaaattactcttccggggcagccaacccttcagggagc
gggtcctcggtgacgatcccgcagcgcatccatcagatggctgccagctacgtccaggtc
acctccaacttcctctatgccactgaaatctgggaacaagcagaacagctctcgagagag
cagaaagagttctttgcagaactggacaaggtgatggggcccctggtgtttaacacgagc
atcatgacggagctggtgcgttacacgcggcagggcctgcactggctgcgcctggacgcc
aagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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