KEGG   Taeniopygia guttata (zebra finch): 100220035
Entry
100220035         CDS       T01082                                 
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04510  Focal adhesion
tgu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100220035 (LAMC1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100220035 (LAMC1)
SSDB
Motif
Pfam: Laminin_EGF Laminin_N Laminin_B Syntaxin_2
Other DBs
NCBI-GeneID: 100220035
NCBI-ProteinID: XP_032605564
Position
8:23471485..23537964
AA seq 1600 aa
MGAGGERWALWLWVLWLWVPARCGAAMDECAEERSGRAQRCMPEFVNAAFNATVLATHTC
GTPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAAFLTDYNSPADATWWQSRTMLAGVQH
PTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTKEDGPWVPYQYYSGSCESTYHKI
NRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDI
RVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCKH
NTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRATGHGGHCTA
CAGNTDGPRCERCRDSFYRLASDQGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGDKCDR
CQPGFHSLSEAGCRPCSCNAAGSTGECNVETGRCACKDNVEGFHCERCKPGFFHLDSSNP
RGCTPCFCFGHSSVCSSAVGYSIYSITSNFEFGEDEWHAEQRDGSEVLLQWSAETQDISV
ISDTYFPMYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLI
AQGNSYPSENVQTYTFRLHEAADYPWRPALTAFEFQKLLHNLTSIKIRGTYSERSAGHLD
DVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCTSGYRRETPGLGPYSPCVPCACNGH
SETCDPETGMCNCRDNTAGTHCEKCSDGYYGDATAGTASDCQPCPCPGTSSCAIVPRTKE
VVCTSCQAGTTGKRCELCDDAYFGDPLGRNGAVRPCRLCQCNNNIDPNAVGNCDRQTGEC
LKCIYNTAGFYCDRCKDGFFGNPLASDPADKCRACHCNPYGTVNQQTVCNQVTGQCECLS
HVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTSGQCDIRTGQCECQPGVTGQQCDSCE
SNHFGFGSEGCKPCDCDPEGSRSLQCRENGHCECKEGFVGSRCNQCEENYFYNRSWPGCQ
ECPACYRLVKDKVAEQRQRLQELENLIANLGTREETVTDEAFEERLKQAEREVTELLHEA
QKSKDVDQGLMDRLKDINSTLVSQLNRLRNIQGTVQETESLAEQARVRVEDTEDLISMAS
DMLEKAKMAADNVSITPPEQSGDPNNMTLLAEEARKLAERHKKEADEIVRTAKAANDTST
EAYQLLLKTLAEENQTAIDIDELNQKYNQARNISRDLEKQANKVLAEAEEAGNRALQIYA
NLTSLPTVDSTGLENKANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKGK
TEQQTADQLLARADAAKALAEEAARKSSGTLQEANTILRNLKDFDRRVNDNKTAAEEALK
KIPAISQTIAEANNKTHQAELALGNAAADAREAKARADDAEKIASSVQKSAAATRAEADK
TFADVTGLAREVDDMMKQLQDAEKELKRKQADAEQDMKMANEASQAAQEAEDNARKAKNS
VNSLLTVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVSFLEREAKKQD
DAIQAYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq 4803 nt   +upstreamnt  +downstreamnt
atgggggccggcggcgagcgctgggcgctgtggctgtgggtgctgtggctgtgggtgccc
gcgcggtgcggcgctgccatggacgagtgcgcggaggagcggagcgggcgggcgcagcgc
tgcatgcccgagttcgtgaacgcggcgttcaacgcgaccgtgctggccacgcacacgtgc
gggacgccggccgaggagtactgcgtgcagaccggggtcaccggcgtcacccagtcctgc
cacctctgcgacgccgcccagccgcacctgagccatggcgccgccttcctcaccgactac
aacagcccggccgacgcgacctggtggcagagccgcaccatgctggccggcgtgcagcac
cccaccgccgtcaacctcaccctgcacctcggaaaagcctttgacatcacgtacgtgcgc
ctcaagttccacacgagccggcccgagagctttgccatctacaagcgcacgaaggaggac
ggcccttgggtgccctaccagtactacagtgggtcctgtgagagcacctaccacaaaatc
aaccgcggcttcatccgcaccggcgaggacgagcagcaggcgctctgcaccgatgagttc
agcgacatctcccctctcaccggaggcaacgtggccttctcaacgctggaggggcggccc
agtgcctacaactttgacaacagccctgtgctgcaggaatgggtgacagctacagatatt
agagtgaccctcaaccgtctgaacacatttggagatgaagttttcaatgacccaaaagtt
ctcaagtcttactactatgcaatttctgattttgctgtgggtggtaggtgcaaatgcaac
gggcacgcgagtgagtgtgtgaagaatgagcttgggaagctggtctgcaactgcaagcac
aacaccttcggggtggactgtgaaaagtgccttcccttcttcaacgaccgcccgtggagg
agagcgacagcggagagcgccaacgagtgcctgccgtgcgactgcaacgggcggtcccag
gagtgctacttcgaccccgagctgtaccgcgccacgggccacggcggccactgcacggcc
tgtgccggcaacaccgacgggccccgctgcgagcgctgccgggacagcttctaccgcctg
gccagcgaccagggctgtctgccctgcagctgcaaccccgtcggctccctcagcacgcag
tgcgacagctatggccagtgcagctgcaagcctggtgtgatgggggacaagtgtgaccgg
tgccagccagggttccactccctctccgaagctgggtgcaggccctgttcttgcaatgct
gctggcagcacaggggagtgcaacgtcgagacagggcggtgtgcgtgcaaggacaatgtg
gaaggattccactgtgagagatgcaaacctggatttttccatctggattcctccaatcca
agaggctgtactccctgcttctgttttggacactcttcagtctgcagcagtgctgtgggc
tacagcatctatagcatcacctccaactttgagtttggagaggatgagtggcatgctgag
cagcgtgatggctcagaagtcttgctgcagtggagtgctgagacccaggacatctccgtt
atctcagacacctacttccccatgtacttcgttgcaccacgcaagttcttgggcaaccag
gttttgagttacgggcaaaacctgaccttctccttccgtgtggacaggcgagacacgcgc
ctctctgcagaggacctggtgctggagggggctgggctgagagtgtcggtgcctctcatt
gcccagggcaactcctaccccagtgagaatgtgcagacctacaccttcaggctccatgag
gctgcagattacccgtggaggcctgctcttacagcatttgaattccaaaagcttctccac
aacttgacttccatcaagatccgtgggacatacagtgagagaagtgccggccacctggac
gatgtcaccatcacgagtgctcgccccggacccggcgtgcctgtggcctgggtggagagc
tgctcgtgtcccgtgggatacgaggggcagttctgtgagcgctgcacctctgggtaccgc
cgggagaccccaggcctcgggccctacagcccctgcgtgccctgcgcgtgcaacgggcac
agcgagacctgtgatcccgagacgggcatgtgcaattgcagggataacacggcagggacg
cactgtgagaagtgcagcgatgggtattacggcgatgccacggccggcacagcctcggac
tgccagccctgcccgtgcccaggcacctcgagctgtgccattgtgccccgcaccaaggag
gtcgtgtgcaccagctgccaggctggcactacaggcaagaggtgtgagctgtgtgatgat
gcctatttcggagacccactgggcagaaatggtgctgtgaggccctgccgcctgtgccag
tgcaacaacaacattgaccccaatgccgtgggcaactgcgaccgccagaccggcgagtgc
ctcaagtgcatctacaacaccgccggcttctactgtgaccgctgcaaggatggcttcttc
gggaaccccctggcctctgaccccgctgacaagtgcagagcttgtcactgcaatccctac
ggcacagtgaatcagcagacagtctgcaatcaagtgactgggcagtgtgagtgcttgtct
cacgtcactgggagggactgcagtgcctgtgagcctggattcttcaacctccagagtgga
cgtggctgtgagaggtgcaactgccacgcgctgggctccaccagtgggcagtgtgacatc
cggacggggcagtgcgagtgccagccaggcgtcaccggccagcagtgtgacagctgtgag
agcaaccacttcggctttggctctgaaggctgcaaaccctgcgactgtgatcctgagggc
tcgcggtccctgcagtgccgggagaacggtcactgcgagtgcaaggagggcttcgtgggg
agccgctgcaaccagtgtgaggagaactatttctacaaccgctcgtggccaggctgccag
gagtgtccagcctgttacagactagtgaaagataaggtggcagagcaacgtcaaaggctg
caggagctggaaaatcttatagcaaatctgggtaccagagaagaaactgtaactgatgaa
gccttcgaagagcggttgaagcaggcagagagagaagttacagagctgctccatgaagca
caaaagagcaaagacgtagatcagggcctcatggatcgtctcaaagacatcaacagcacc
ttagtgagtcagctcaacaggctgaggaacatccagggcacagtgcaggagacggagagc
ctggcggagcaggcccgggtgcgggtggaggacactgaggacctgatcagcatggcttct
gacatgctggagaaggccaagatggcagctgacaacgtgtccattacacctccagagcaa
agcggggaccccaacaacatgactctgctggcagaagaggcccgtaagctggcagaaagg
cataaaaaggaagctgatgagattgttcgcacagccaaggctgcaaatgacacttccacg
gaagcgtatcaactgctgctgaagacgttggctgaagaaaaccaaactgcaattgatatt
gatgagctcaatcagaagtacaatcaagcaaggaatatttctcgagacctggagaaacag
gccaacaaggtgcttgcggaggcagaggaagctggaaacagagccctgcagatatatgct
aatctcaccagcctgcctactgtggattccacggggctagagaataaagcaaataagatc
aagaaggaagcagaggagctggatcaactaattgccaggaagctaaaggattatgaggac
ttgagagaagatatgaaaggaaaggagctagaagtaaagaacctcttggagaaagggaag
acagagcagcagactgcagaccagctgttggcacgagcagatgcagcaaaagccctggct
gaagaagctgctcggaagagcagtggcacgctacaggaggccaataccattctcaggaac
ctgaaagactttgacaggcgggtgaacgataacaagacggcagccgaggaggcactgaag
aagatccctgccatcagccagaccattgcagaggccaacaacaagactcaccaggcagag
ctggcactgggcaacgctgctgccgatgcccgtgaggccaaggccagagcagatgatgct
gagaagattgccagctctgttcagaagagtgctgctgctaccagagccgaagccgacaag
acctttgctgatgtgacaggactggccagggaagtggatgacatgatgaagcagctgcag
gatgcagaaaaggagctgaagcggaagcaggccgatgctgagcaggatatgaagatggca
aatgaggcctcacaggctgcccaggaggcagaagacaatgcaagaaaagctaagaactcc
gtgaacagcctgctcactgtcattaatgacctgttggatcagctagggcaactggagaca
gtggacttgaacaaactgaatgaaattgaaggtaccctgaacagtgccaaagaccagatg
aaagacagtgacctggaccagaaagtgtctttccttgagagagaagccaagaagcaagat
gatgcgatacaggcctacaacagggacattgaagagatcctgaaggacattagcaacctg
gaagacatcaggaagactctgccatctggctgtttcaacaccccgtccattgagaaacct
taa

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

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