KEGG   Taeniopygia guttata (zebra finch): 100221244
Entry
100221244         CDS       T01082                                 
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
  KO
K10646  E3 ubiquitin-protein ligase TRAF7 [EC:2.3.2.27]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100221244 (TRAF7)
Enzymes [BR:tgu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100221244 (TRAF7)
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100221244 (TRAF7)
SSDB
Motif
Pfam: WD40 NBCH_WD40 WD40_like zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-TRAF zf-C3HC4_4 Sina_ZnF Nup160 zf-C3HC4_3 zf-RING_5 PKcGMP_CC DUF4164 DUF641 MIOS_WD40 DUF1664 Filament KxDL DUF16
Other DBs
NCBI-GeneID: 100221244
NCBI-ProteinID: XP_012433284
Ensembl: ENSTGUG00000006321
UniProt: A0A674GTS4
Position
14:7335080..7363610
AA seq 670 aa
MSSNKNGRYNRFPSGTTNVPTSENTNGTRMETTFGPAFSAVTTITKADGTNTFKQHRRTP
SSSSTLTYSPRDEDDGMPPISTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKPTAFEVDPRGCPFTVKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCAFIGNQDTYETHLESCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagctcaaacaagaacggtcgctacaatcgtttccccagtggcaccacaaacgtccca
acttctgagaacactaacgggacaagaatggaaacaacttttggaccagccttctctgct
gtgaccaccatcacaaaggctgacgggaccaatactttcaagcagcaccgtcggaccccg
tcctcctccagcaccctcacctactcgccacgggatgaggatgatggcatgcctccgatc
agcaccccgcgccgctccgactccgctatctccgtccgctccttgcactccgagtccaac
atgtccttgcgctccacgttctcactccatgaggaagaggaggagccagagcccctggtg
tttgcagagcagccgtccgtgaagctgtgctgccagctgtgctgcagtgtgtttaaggat
cccgtcatcacaacctgtgggcacacgttttgcaggagatgtgccttaacatctgagaag
tgccccgtggacaacgccaagctgacggtggtggtgaacaacattgcggtggccgagcag
atcggggagctgttcatccactgcaagtacggctgccggcccgccgccagcagcaagccc
accgccttcgaggtggacccccgcggctgccccttcaccgtcaagctgagtgccaggaag
gatcatgagagcagctgtgattacaggcccgtgcgctgccccaacaaccccagctgccct
cccctcctcaaaatgaacctggaggctcacctgaaggagtgtgagcacatcaagtgtccc
cactccaaatatgggtgtgcattcataggaaaccaggacacctatgagacccacctggag
agctgcaagttcgagggtctgaaggagttcctgcagcagacagacgatcgcttccacgag
atgcaggtggccatggcccagaaggaccaggagatcgccttcctgcgctccatgctgggg
aagctctcagagaaaatcgaccagctggagaagaacctggagctgaagtttgatgtgctg
gacgagaaccagagcaagctgagcgaggacctgatggaattccgcagggacgcctccatg
ctgaacgatgagctctcccacatcaacgctcggctcaacatgggcatccttggatcctat
gatcctcagcagatcttcaagtgcaagggcacctttgtgggccaccagggccctgtgtgg
tgtttgtgtgtgtactccataggagacttgctcttcagtggctcctcagacaaaaccatt
aaggtgtgggacacctgtaccacatacaagtgccaaaagaccctggagggtcatgatgga
attgtgctggctctctgcatccaggggaacaagctgtacagtggctctgctgactgcacc
atcatcgtctgggatattcaaaacctgcagaaggtgaacacgatccgagcgcacgacaat
cctgtttgcactttggtctcctcacacaacatgctcttcagtggctccctcaaagccatc
aaggtgtgggatattgtgggtactgagctcaagctgaagaaggagctgacaggtctcaac
cactgggttcgagcactggtggcttcccagaactatctctacagtggatcttaccagacc
atcaagatctgggacatccggaacctggagtgtgtgcacgtgctgcagacgtcgggaggc
agcgtgtactccatcgccgtgaccaaccaccacatcgtgtgcggcacctacgagaacctc
atccacgtgtgggacatcgagagcaaggagcaagtccgcacgctgaccgggcacgtgggg
acagtctacgccctggccgtcatctccacgcccgatcaaaccaaagtcttcagcgcctcc
tacgaccgctcgctcagggtgtggagcatggacaacatgatctgcacccagaccctgctg
cgccaccagggcagcgtcaccgccctggccgtgtcccgcggccgcctcttctccggcgcc
gtggacagcactgtcaaggtctggacgtgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (20)   
   Pfam (20)   
All databases (62)   

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