KEGG   Taeniopygia guttata (zebra finch): 100221356
Entry
100221356         CDS       T01082                                 
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tgu01009]
    100221356 (VPS54)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgu04131]
    100221356 (VPS54)
Protein phosphatases and associated proteins [BR:tgu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100221356 (VPS54)
Membrane trafficking [BR:tgu04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    100221356 (VPS54)
SSDB
Motif
Pfam: Vps54 Vps54_N EXOC6_Sec15_N SBP_bac_6
Other DBs
NCBI-GeneID: 100221356
NCBI-ProteinID: XP_030125140
Ensembl: ENSTGUG00000002268
Position
3:110014804..110059554
AA seq 970 aa
MASSHSSSPVPQSNSSDAFFKKEVDATKHFRPVQSLPDVCPKEPTGNPNDLHDSPSLVVD
QQRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGMDFVDTEVTPSFYLPQITKEDFALY
QQEITPREKVHERCKNICTPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKISKIDKVMCEGSLRVLRLSLTRNNCIKVYNKLKLMATVHQTQ
PTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMINTAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLKNIFSKFTIFLKRVKATLNTIRSVVFLVL
DKNQKTRESRDLEDTLQKNSAKESVVDSEVAYLTHEGMFISDAFGEADSQRNVSPSSEPC
SSDSVSEPEGTTDSSSSKEHTSSSATPGGVEMMISEDMKLTDLELVRLANNIQELLYNAS
DICHDRSVKFLMARAKDGFLEKLNSSEFVTLSRLMEGFILDTEQICGRKSMSLRGALQSQ
ANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPTATEERK
PAEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFNSRSCQL
VLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLRHFDHIT
KDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIYDLLPE
EQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLQALKGLNNLDL
NMAEIWEQKR
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggcatcaagccacagttcttcaccagtgcctcagtcgaacagcagcgatgctttcttt
aaaaaagaagtggatgccacgaaacacttccgacctgtgcagtccctgccagacgtgtgt
cccaaggagcccacaggcaatcccaatgacttacatgacagcccatctctagttgtggat
caacaaagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggaatggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaagattttgcattatac
caacaggaaatcactccgagagagaaggttcatgaaaggtgcaagaatatttgtactcct
aaagatacctttgacaggacactattacacactcacgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacgtttaat
gccgttttaccatggtctcattttagtactgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttgcttcaagaaaagctgagccattatctggacatcgtggaagtcaatatt
gctcatcagatttctctccgttcagaagcattttttcatgcaatgacctctcagcatgag
ttgcaggactacctcaggaaaacctcccaggctgtaaaattgcttagagagaaaatctct
aaaattgataaagtaatgtgtgaaggatcgcttcgagttttaagactgtcgctcaccaga
aataactgtataaaagtatacaataaactgaagttaatggctactgtacaccaaacacag
cccacagtacagctgctgctctccacttcggagtatgttggagctttggacttaatagca
acaacacaagaggtgttacagcaagagctgcaaggtattcacagtttccggcatcttggc
tcacagctttgtgaactggagaagctgatagataaaatgatgattgcagagttttcaact
tatgctcgcaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
agacttgtatctctagtatttggacttctaaaacaaaggaagctaaatttttatgaaata
tatggagatgaaatgattaatactgcaaagaatataattaaacagtgtgtggttaatacg
gtatcacagatagaagaaatagacacagaagtggttgttaagcttgcagaccagatgagg
atgatgaattttcctcagtggtttgatttactgaagaatatattttcaaaattcactatc
ttcctcaagagagtaaaggcaacgttaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaccagagaaagcagagacctggaggacacgttacagaagaactct
gctaaggagagcgtggtggacagcgaggtggcctacctgacccacgaggggatgttcatc
agcgacgccttcggcgaggcggactcccagaggaacgtctcccccagcagcgagccctgc
agcagcgactccgtctccgagcccgagggcaccaccgactcctcctccagcaaggagcac
acctcctcttctgccactccaggaggagtggagatgatgatcagcgaggacatgaagctg
actgacctggagctggtcaggctggcaaacaacatccaagagttactttacaacgcctct
gacatctgccacgatcgttcggtcaagttcctcatggcaagggcaaaggatggcttccta
gagaagctgaattccagcgagttcgttactctttctcgcttgatggaaggctttatcttg
gatactgagcagatctgtggcaggaaaagcatgtccttgagaggagctcttcagagtcaa
gccaatagatttgtgaataggtttcatgaggagaggaagacaaaactaagcttgcttttg
gacaacgagcgctggaagcaagctgaggttcctgccgagttccaggacctcgttgattcg
gtgtcagatggcagaatttctctccctgaaaaaaaaccaacagctactgaagaaagaaag
ccagctgaattccttattgttgaaggacaaaaatatgcaacagttgggacagtattgctg
ctaataagaataatcctggagtactgccagtgtgtggataacattccttccatcaccact
gacatgctgacccgcctgtcggatttactcaagtatttcaactctagaagttgccaatta
gtgcttggagctggtgcattacaagttgttggcttgaaaacaatcactacaaaaaaccta
gccctttcttcgcgttgcctccagctcatcgtacactacattcccattatcagggctcat
tttgaagctcggctgcagccgaagcagttcagcatgctcaggcattttgaccacatcaca
aaggattatcatgaccacatagctgaaatttcagcaaagctcgttgccataatggatagc
ttatttgacaaactattatccaagtatgaagtgaaagcccctgttccttcagcatgcttc
aggaatatctgcaagcaaatggcaaagatgcatgaagctatatatgatctccttcctgag
gagcaaactcagatgttgtttttacgaattaatgcaagctacaaactccacctgaagagg
cagctggcccacctcaatgtggtcaatgatggaggacctctgaacgggctggttacctca
gatgtggctttttacactggaaaccttcaagctctgaaaggccttaacaacttagatcta
aacatggctgaaatctgggagcagaagaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system