KEGG   Taeniopygia guttata (zebra finch): 100221526
Entry
100221526         CDS       T01082                                 
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
  KO
K11857  ubiquitin carboxyl-terminal hydrolase 47 [EC:3.4.19.12]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tgu01002]
    100221526 (USP47)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100221526 (USP47)
Enzymes [BR:tgu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100221526 (USP47)
Peptidases and inhibitors [BR:tgu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   100221526 (USP47)
Ubiquitin system [BR:tgu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100221526 (USP47)
SSDB
Motif
Pfam: USP47_C UCH UCH_1 Ubiquitin_2 ubiquitin Sad1_UNC
Other DBs
NCBI-GeneID: 100221526
NCBI-ProteinID: XP_030129307
Position
5:complement(5525903..5577794)
AA seq 1465 aa
MDWRRGGAAALPAGAEEVEEEEEEEVEEEEEEEEEEEKGEDEPRASPRLPLLLTTALGSA
CCGLRAAPPAMVPSEENQLVPKEDMFWSCRQSIFAEMKKKFSQAECAAEEPRVLCIIQDT
TNSKTVNERVTLNLPASTPLKRLFEDVAAKVGYVNGSFDLLWSNGDSVTDTQTPIDQNSD
KTILDAGFEPGKKNFLHLTDKDGEQPHVMQEESGTTEDGAQERFIGPLPREGSIGCTHDY
VSQNYSYSSVLSKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPE
RSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWK
QTEQADLINQLYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHA
FIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM
TFPEELDMSVFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESN
SAAERISKAGSEKSSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQ
EDIKKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKE
RELEEQEKRQREIERNTCKLCNQLKGNHPTAEAELKIKLFCMHPTKQIMMENKLEVHKDR
TLKEAVEMAYKLMDLEEAVPLNCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGGVKSTYM
FDLLLETRRPDQIFQCYKPGEVMVKVHVVDLKTESVAPSISVRAYLNQTVSEFKQLISKA
THLPAETMRVVLERCYNDLRLLNMSSKTLKAEGFFRSNKVFVESSESLDRHVTYTDSQLW
KLLDRHANTIRLYVSLPEQAPGSQLRRALYHKSGGGAGNVDEPCERVKGPVGNMKSVEAI
LEESTEKLKSLSLQQQQQQEGDNGDSSKSTEASDFENIESPLNEIDSSASAENRELDNQI
QVSDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNVDNAPLPLANGLDSHSI
TSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYFKSEPYTTEEGSGEGQK
WLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKI
TIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQSKEELLPQLQEQCGLD
LTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILDGVEKMKSMSQLAVLSR
RWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAKGRGTFPCDISILEIHQ
DLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMKKESSRLQKTGHRV
TYSPRKEKALKIYLDGAPNKDLTQD
NT seq 4398 nt   +upstreamnt  +downstreamnt
atggattggcggcggggcggggccgcggcgctgcccgcgggagcggaggaggtggaagag
gaggaagaggaggaggtggaagaggaagaagaagaggaggaggaggaggagaagggggag
gatgagccgcgggcgtccccccgcctcccgctgctgctgacgacggcgctcggttcagcc
tgctgcgggctccgcgccgcgccaccggccatggtgcccagcgaggagaaccagctcgtc
cccaaagaggatatgttttggagttgcagacagagtatctttgctgaaatgaagaagaag
ttttcccaggcagaatgtgctgctgaggagcccagggtgctgtgtataatacaggacacc
acgaattccaagacggtgaatgagcgtgttaccctgaacctgccagcttccaccccgctc
aaacggctctttgaagacgtggctgccaaagtgggctacgtcaatggctcttttgatttg
ctgtggagcaatggagacagtgtcactgacacgcagactccaatagatcagaacagtgac
aaaaccattcttgatgctggttttgagccagggaagaagaactttctgcatttgacagac
aaggatggtgagcagcctcatgtaatgcaggaggagtcgggtacaacagaggatggtgca
caggagagatttataggtccccttccaagagaaggctccattggatgtacccatgactat
gtcagtcaaaactattcttattcttcagtcctgagcaaatcagaaacaggttatgtgggg
ctggtaaatcaagcaatgacttgctacttgaacagccttctgcaaacacttttcatgact
cctgaatttagaaatgcattgtataagtgggaatttgaggaatctgaagaggatcctgag
aggagtatcccctaccagcttcaaagactgtttgttttactgcagaccagcaaaaaaagg
gcaattgaaacgacagacgttacacggagttttggctgggacagtagcgaagcatggcag
cagcatgatgtgcaggagctttgtagagtcatgtttgatgctttggagcagaaatggaag
caaacagagcaggctgatcttataaatcaactgtaccaaggcaagctgaaggactatgtg
aggtgcctggagtgtggctatgaaggctggagaattgacacgtacctggatatccctctg
gtcatccggccctatggctccagccaggcgtttgctagcgtggaagaagcgctgcatgct
ttcattcagcctgagatccttgatggcccaaatcagtacttttgtgagcgatgtaagaag
aaatgtgatgcaaggaagggtctgcggttcttgcactttccgtacctgctgactttacag
ctgaagagatttgactttgattacaccacaatgcacagaattaaactcaatgatcgcatg
acttttccagaggagttggacatgagtgtctttattgatgttgaagatgagaagtctcct
cagaccgagagttgcactgatagtggagctgaaaatgaaggcagttgtcacagtgatcag
atgagcaatgatttttctaatgatgatggagttgatgaaggaatctgccttgaaagcaat
agtgcagcagagaggatctctaaagctggcagtgaaaagagttctttgctatatgagctc
ttttctgtcatggttcattctggaagtgctgctggtggccattattatgcctgtataaaa
tcttttagtgatgatcagtggtacagctttaatgatcagcacgttagcaagataactcag
gaagatattaagaaaacatatggaggatcttctggaagcagaggatattattccagtgct
tttgctagctccacaaatgcttacatgctgatatacagactgaaagatccaacaagaaat
gcaaagtttctggaggcacatgaatatccagagcacattaaacaattggtacagaaagag
agagaattagaagaacaagaaaagaggcaacgtgaaattgaacgcaacacgtgcaagttg
tgtaaccagctgaaaggaaaccaccccacagctgaagcagagctaaagattaaattattc
tgcatgcatcctacaaagcaaataatgatggagaacaaattggaagttcataaggacaga
acactgaaggaagctgtggaaatggcttacaagttaatggatttagaagaggctgttcca
ttgaactgctgtcgccttgtcaagtatgatgagttccatgactacttggagcgctcttac
gaaggagaagaggataccccaatgggtttgttacttggaggggtcaagtcaacctacatg
tttgatttactgttggaaacaagaaggcctgaccaaattttccagtgctataaacctggt
gaggtcatggtaaaggttcatgtagttgacctgaagactgaatctgttgccccttcaata
agtgtgcgagcttatttgaatcaaacagtttcagagtttaagcagctaatttcaaaggcc
acacacctgcccgccgaaaccatgcgggtggtgctggagaggtgctacaatgacctgcgt
ctgctgaacatgtccagcaaaacactgaaagctgaaggcttttttagaagcaacaaggtg
tttgttgaaagctcagagtctttggaccgtcatgtgacatacacagactctcagctgtgg
aagcttttggatcgccatgcgaacaccatcagactgtacgtgtcattgccagagcaagct
cctggatctcagctcagacgggcgctttatcacaagtctggtgggggtgcaggcaatgtg
gatgaaccttgtgagagagtaaaaggacctgtaggtaatatgaaatctgtagaggcaatt
ttggaagaaagtaccgaaaaacttaaaagcttgtccctgcagcaacagcagcagcaggag
ggagataatggagacagcagcaaaagcacagaagccagtgattttgaaaacattgagtca
cctttaaatgaaatagactcttcagcatcagcagaaaacagagaacttgacaaccaaatt
caggtttctgatccagagaatctgcagtccgaggagcggtcagactcggatgtcaataat
gacaggagtacgagttcggtggacagtgacatcctgagctccagccacagcagcgacact
ttgtgcaacgtggacaacgccccccttcccctggctaatggactggactctcacagcatc
acgagtagcaggcgatcaaaagccaatcagggcaagaaggaaacctgggacacagcagaa
gaggattctggaacagacagtgaatatgatgaaagtggcaagagcagaggagaagcacaa
tatatgtactttaaatcagaaccctacactacagaggagggttcaggagaagggcaaaaa
tggctgatggtgcatgttgacaaaagaattacactgtctgccttcaagcaacacttggag
ccttttgttggagttccatcttctcacttcaaagtctttagagtctatgccagcaatcaa
gagtttgagagtgttcggctgaatgagaccctttcgtcattttctgatgacaataagata
actattagacttggaagagcccttaagaagggtgaatacagagttaaagtctatcaactc
ttggtaaatgagcctgagccctgcaagtttcttctagatgcagtttttgctaaaggaatg
actgtccgacagtccaaagaggagctgcttcctcagcttcaagaacaatgtggcctagac
ttgacaattgacaggtttcgcctacgaaagaaaacctggaagaatccaggtactgtgttt
ctggattatcatatctatgaagaagatatcaatatttccagcaactgggaggtcttctta
gaaatacttgatggagtagaaaagatgaaatccatgtcacaacttgctgttttatcaaga
cgatggaggccgtcagagatgaaattagattctttccaggaagtagtactagaaagcagc
agtgtcgaagaattaaaagagaagctaagtgaaataagtggaatacccttagaaaacatt
gaatttgcaaagggtagaggaacctttccctgcgacatttccatcctagagattcatcaa
gacttggactggaatccaaaagtatccacattgaatgtctggcccctgtacatttgtgat
gatggtgcagtaatattttatagggataaaactgaagaattaatggaattaacagatgag
caaagaaatgaactgatgaaaaaagaaagcagcagactccagaaaactggacaccgggta
acctactctccccgtaaagaaaaagcactaaaaatttatctggatggagcaccaaataaa
gatttgactcaagactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system