KEGG   Taeniopygia guttata (zebra finch): 100222509
Entry
100222509         CDS       T01082                                 
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100222509 (TDG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100222509 (TDG)
Enzymes [BR:tgu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     100222509 (TDG)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     100222509 (TDG)
SSDB
Motif
Pfam: UDG GAGA_bind
Other DBs
NCBI-GeneID: 100222509
NCBI-ProteinID: XP_030119034
Ensembl: ENSTGUG00000011175
Position
1A:complement(52696254..52705935)
AA seq 407 aa
MDGPELGRYYAYLQQAQAFYSFPFHQMMTAVPNMEMMTEQPTLEGIPEPNIAQEPPKEVK
KGGRKRKAKATEPKQPKKPAAKKEKPAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLP
HKYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEV
FGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
APNTEIQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYDTDQCSLSSN
GTGSNPQYCEGSSFSEVPNGQWMTQSFADQIPEFNAAMTREEEGSSV
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggacggcccggagctgggcagatactacgcatatcttcagcaagctcaagcgttttac
tcatttccattccatcagatgatgactgcggtgcccaacatggaaatgatgactgagcag
ccgactctagagggcattccagagccaaacattgctcaggagcctccaaaagaagttaaa
aaagggggaaggaaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgct
gctaaaaaagaaaaaccagccaagtcaaaaggcaaacaagaaaagatcacagatactttt
aaagtcaaaagaaaagtggaccgttttaatggtgtatctgaagctgaacttctgaccaag
actttgcctgatattttgacctttgatctggacattgtgataattggcataaaccctggc
ctgatggcagcttacaaaggacatcattacccgggacctggaaaccatttttggaaatgt
ctgttcatgtctggtctaagtaatgaacagctgaaccacatggatgaccacaccttgcca
cataaatatgggattggatttacaaacatggttgaaaggacaacacctggaagcaaagac
ctctccagcaaagagtttcgggaaggagggcgaattctgatgcagaagctacaaaagtat
aaacctcgtatagcagcttttaatggaaaatgtatttatgaaatttttagtaaagaagtt
tttggaattaaagttaagaacttggaatttgggctgcagccacacaaagtgccagataca
gaaactctctgctatgttatgccatcgtccagtgcaagatgtgctcagtttcctcgggca
caagataaagttcattattacattaagctgaaagacttaagggatcaactgaaaggcatt
gcacccaacacggaaatccaggaggtgcagtacacctttgacttgcaacttgcacaagag
gatgctaaaaagatggctgtcaaagaagaaaagtatgacccaggctatgaagcagcatat
ggaggagcttactgtgaccgtgcaccatatgacactgaccagtgcagcttgtcttcaaat
ggaactggaagcaatcctcagtactgcgaagggtcgtccttcagcgaggttcctaacgga
cagtggatgacacagtcctttgcagaccagattccagagttcaatgctgccatgacacgg
gaagaggaggggagcagcgtgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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