KEGG   Taeniopygia guttata (zebra finch): 100222912
Entry
100222912         CDS       T01082                                 
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03030  DNA replication
tgu03410  Base excision repair
tgu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100222912 (FEN1)
   03410 Base excision repair
    100222912 (FEN1)
   03450 Non-homologous end-joining
    100222912 (FEN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tgu03032]
    100222912 (FEN1)
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100222912 (FEN1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tgu04147]
    100222912 (FEN1)
DNA replication proteins [BR:tgu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100222912 (FEN1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     100222912 (FEN1)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100222912 (FEN1)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100222912 (FEN1)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc 5_3_exonuc_N XPG_I_2
Other DBs
NCBI-GeneID: 100222912
NCBI-ProteinID: XP_030129467
Ensembl: ENSTGUG00000006627
Position
5:8739228..8742321
AA seq 386 aa
MGIHGLAKLIADVAPGAIRENDIKAYFGRKVAIDASMSIYQFLIAVRQGADVLQNEDGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE
ENIEKYSKRLVKVTPQHTQECKKLLTLMGIPYVEAPGEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLQLTWEQFVDLCILLGCDYCASIRG
IGPKRAVELIREHKSIERIVQQLDTKKYPLPENWLHREAQKLFLEPDVIDPDAVELKWSE
PDEEQLVQFMCGEKQFNEERIRNGVRRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPEP
KGGAKKKAKTNSKPNGTTATKTKKAK
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgggaatccatggcttggccaagcttatcgccgacgtggctcccggggccatccgggag
aacgacatcaaggcctactttggccggaaagtggccatcgacgcctccatgagcatctac
cagttcctgattgccgtgcggcagggagccgatgtgctgcagaacgaggatggggagacc
accagccacctgatgggaatgttctaccgcaccatccgcatggtggagaatggcatcaag
ccggtgtacgtgttcgacgggaagccaccacagctgaaatccggggagctggccaagcgc
acggagcgccgggccgaggcggagaaacacctgcaggaagcacaggaggctggggaggag
gagaacatcgagaagtacagcaagaggctggtcaaggtgaccccgcagcacacgcaggag
tgcaagaagctgctgacgctgatgggaattccctatgtggaggcacctggagaggcagag
gccagctgtgccgccttggtgaaggctgggaaggtgtacgccgccgccacggaggacatg
gattgcctcaccttcggtagccccgtgctgatgcggcacctcacagccagtgagaccaag
aagctgcccatccaggagttccacctgaaccggattctgcaggatctgcagctgacctgg
gagcagtttgtggacctgtgcatcctgctgggctgcgactactgcgccagcatccgcggc
atcgggccgaagcgcgccgtggagctcatccgggagcacaaatccatcgagaggatcgtg
cagcagctcgacaccaagaagtaccccctgcccgagaactggctgcacagggaggcccag
aagctcttcctggagcccgacgtgatcgatcccgatgccgtggagctgaagtggagcgag
ccggacgaggagcagctggtgcagtttatgtgtggggagaagcagttcaatgaggagcgc
atccgcaacggcgtcaggaggctgagcaagagccgccagggaagcacccagggccggctc
gacgacttcttcaaggtcaccggatccatcacctcggccaagcgcaaggagccggagccc
aagggaggggccaagaagaaagccaagaccaactccaagcccaatggcaccaccgcgaca
aagactaaaaaggcaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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