KEGG   Taeniopygia guttata (zebra finch): 100224464
Entry
100224464         CDS       T01082                                 
Symbol
DQX1
Name
(RefSeq) ATP-dependent RNA helicase DQX1 isoform X2
  KO
K14433  ATP-dependent helicase [EC:5.6.2.-]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgu03041]
    100224464 (DQX1)
Spliceosome [BR:tgu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    100224464 (DQX1)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N AAA_22 AAA_19 AAA_16 AAA_25 nSTAND3 T2SSE AAA_11
Other DBs
NCBI-GeneID: 100224464
NCBI-ProteinID: XP_030126146
Position
4:complement(1874436..1882470)
AA seq 745 aa
MAGSAAPGPLPGPSSPGSALEEDEEEDENEEEDPSLSCDGDLEVNPYDGLPFSSRYYELL
RQRRELPVWSTKYSFMEHLEGNSGIVLVSGAPGTGKSTQIPQWCAEYALSMSFAHGLVAC
TQPHSLAALSLSLRVADEMDLNLGHEVGYCVPHEDCCTPDTILRFCSDEMLLREMTSDPL
LRQYGVVVLDEAQERTVPTDALLGLLKDVLRQRPALRLVVVTSPALEPRLRSFCGDPPVV
RVPGHGSPPQLLYREPSAHGSVAAACQAVLDIHRRQEPGHVLIYLASEQEISECCSAIQT
EAAALSAALGPLLVLPLHPGVGRAAQRLYETPEESRERRVIVTHRLGDSSFSLGTVRFVI
DSGLELRSVYNPRIRAESQVLRPISRSQAESRMQRAAGSPPGTCLRLYSEAFEQRLPPSP
APHVSETSLSRLVLLLKRLDIADMGQCDFLDRPAPESLMQALEDLDYLAALDDDGNLSEV
GIIMSEFPLDPQLAKALIASCEFDCVEEMVSLAAMLTASPCFVPLSTHLEEAVALRRRAL
LHPSGDHFTLINIFNAFQQHGGDEGWCRKHGVCAEALRLAGTVRAELLEVMRRIELPVSP
PAFGSDTNALNIQRALISGYFLKVARDIDGSGNYVMLTHKHVAHLAPACGYLLRSPPRRL
PPWVLYHEFSISQDNCLRVVSEIQPQMLVELAPQYYLSNLPPSEGRDLLMELRDKVVAAE
EAPAEPELAQAAGGEDEHGDVCVLQ
NT seq 2238 nt   +upstreamnt  +downstreamnt
atggccggttccgcggccccgggtcccctgcccgggccgagcagccccggctccgctctg
gaagaagatgaggaggaggatgagaatgaggaggaagatccgtccctgagttgcgacggc
gacctggaggtgaacccctacgatgggctgcccttctcctcccggtactacgagctgctg
cggcagcgccgggagctgccggtgtggagcaccaagtacagcttcatggagcacctggag
ggcaacagcggcatcgtgctggtgtccggagcccccggtaccggcaagagcacgcagatc
cctcagtggtgcgccgagtacgccctgtccatgtccttcgcccacgggctggtggcctgc
acccaaccccacagcctggccgccctcagcctctcgctgcgtgtggctgatgagatggac
ctgaacctgggccacgaggtgggctactgcgtgccccacgaggactgctgcacccccgac
accatcctcaggttctgctcggacgagatgctgctgcgggagatgacgtcggacccgctg
ctgcggcagtacggggtggtggtgctggacgaggcgcaggagcgcacggtgcccacggac
gcgctgctggggctgctcaaggacgtgctgcgccagcgcccggccctgcgcctcgtggtg
gtcacctcgcccgccctggagccgcggctgcgctccttctgcggggatccacccgtggtg
cgcgtcccggggcacggatccccgccacagctgctctaccgggagccatcggcccacggg
agcgtggccgctgcctgccaggccgtgctggacatccaccggcgccaggagcccggccac
gtcctcatctacctggccagcgagcaggagatctccgagtgctgctctgccatccagacg
gaggcggcggcgctgagcgcggcgctgggcccgctgctggtgctgccgctgcaccccggc
gtgggtcgggctgcgcagcgactctacgagacccccgaggagagccgggagcggcgtgtc
atcgtcacccaccggctcggggactcgtccttctcgctgggcaccgtgcgcttcgtcatc
gactcggggctggagctgcgcagcgtgtacaacccccgcatccgcgccgagtcgcaggtg
ctgcggcccatcagccggagccaggccgagtcacgcatgcagcgagcagctggcagcccc
ccaggcacctgcctgcgcctgtactcggaggcgtttgagcagcggctgccccccagcccc
gcgccccacgtcagtgagaccagcctgagccgcctggtgctgctgctgaagcgcctggac
atcgctgacatgggccagtgcgacttcctcgaccggccagcccccgagtcgctgatgcaa
gcgctggaggacttggactacctggcggccctggatgatgacgggaatctgtcggaggtg
gggatcatcatgtcggagttcccgctggacccgcagctggccaaggccctcatcgcctcc
tgcgagttcgactgcgtggaggagatggtcagcctggctgccatgctcacagcatccccc
tgcttcgtgcccctgtccacgcacctggaggaggccgtggccctgcgccggcgggcgctg
ctgcaccccagcggggaccacttcaccctcatcaacatcttcaatgccttccagcagcac
gggggggacgagggctggtgccgcaagcacggcgtgtgtgccgaggcgctgcgcctggcg
ggcaccgtgcgcgccgagctgctcgaggtgatgcgccgcatcgagctcccggtctcacca
cccgccttcggctccgacaccaacgccctcaacatccagcgcgccctcatctccggctac
ttcctcaaggtcgcccgagacatcgatggctccggtaactacgtgatgctgacgcacaaa
cacgtggcacaccttgcccccgcctgtgggtacctgctgcgctcacccccacgccgcctg
cccccctgggtgctctaccacgagttcagcatctctcaggacaactgcctgcgcgtggtc
tcggagatccagccccagatgttggtggagttggcaccacagtactacctgagcaatctg
ccacccagtgagggccgggacctgctgatggagctgcgggacaaggtggtggctgcagag
gaggcgccggcagagccggagctggcacaggcggccggaggcgaggatgagcacggggac
gtctgcgtcctgcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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