KEGG   Taeniopygia guttata (zebra finch): 100225784
Entry
100225784         CDS       T01082                                 
Name
(RefSeq) protocadherin beta-15
  KO
K16494  protocadherin beta
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tgu04515]
    100225784
Cell adhesion molecules [BR:tgu04515]
 Cadherins
  Protocadherins
   100225784
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 Big_9
Other DBs
NCBI-GeneID: 100225784
NCBI-ProteinID: XP_030139510
Position
13:7551012..7555428
AA seq 813 aa
MALARQVLCLSAFLSLPLARAEPIRYSVAEEAESGSLVGKLAEDAGLTPAQLSARRARLV
SEDGRQHFRFERASGRLVVAGRLDREELCGQAATCMLPFELLLSNPLQFFRVEVTLDDIN
DHSPVFPEERVTFKIPETSEPGSRFPLEVARDHDIGSNTAQEYRISPKSKLFSVSYGSRS
NGDKYLDLVLDRPLDREEEAEMGFSVIAVDGGSPPRSGTIEISIIILDANDNAPIFTQDR
YIGRIMENMPEGSVVLTVLATDQDAGVNGDISYQLSLEVGQSDSAFVIDPITGEIKLRKP
LDFEAAERHEMSVRATDGGGLSAICKVLVEVVDVNDNVPELVVSSFSSPIPENTVPGTVV
ALFSVRDRDSGANGKISCALEDQLSFSLRPAYKNYYELVTVSALDREEMPQYILSVTAAD
AGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAISAGDADVGLNAK
VTYSLAPEQGAERPSCSCISVNSENGHVFVLRPLDYEHLRQTEVTVSACDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQDGSPASSELVPVWAEAGYLIGKVVAVDADSGQNSWLSYH
LLRATDPGLFSVAVQSGEVRLRRPVTERDSVKQKLVVLVRDNGKPPLSATAALSALLLKD
FSDVRLPHSSPAPEDQDGSLTTYLIISLVFVSLLFLISSAVFVARKACRRKELEAGHVLY
GADNLQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFKFLRPILPSLPPQHCALGQGPDE
EQDFPCVPVSTEDMAPDNAGTLTAGQFNALSFD
NT seq 2442 nt   +upstreamnt  +downstreamnt
atggcgctcgcaaggcaagtgctttgtctctctgctttcctctcgctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtgggcaag
ctggcggaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtc
tcggaggacggccggcagcattttcgcttcgagcgcgcctccggccgcctcgtcgtggcg
gggaggctggaccgggaggagctgtgcggccaggccgccacctgcatgctccccttcgag
ctgctgctctccaaccccctgcagttctttcgggtcgaggtgactctggacgatatcaat
gaccattcacccgtctttcccgaggaacgagtcacttttaagattccagagacgagcgag
ccaggctctcgtttccccctggaggtggctcgggaccacgatattggcagcaacacagcc
caggagtacaggatctctccgaagagtaagcttttcagtgtctcttatggaagtcggagt
aatggtgacaaatatcttgaccttgttttggataggccactagacagagaggaagaggca
gagatgggtttcagtgttattgccgtggatgggggctctcctcccagaagtgggaccatc
gagatctctattatcattctagatgcaaatgacaatgctcccatcttcacacaagatcgt
tatattgggaggattatggaaaacatgccagaaggctctgtggttctgactgtgctggca
actgatcaggatgcaggagttaatggagacatctcctatcagctcagcctggaagtggga
cagagtgactcagcatttgtgattgatcccataactggtgaaattaaactcagaaaacca
ttagactttgaggcagcagaacgtcatgagatgagtgtgagggctacagacggagggggt
ctctcagccatctgcaaagtgttggtggaggtggtggatgtgaacgacaatgtcccagag
ctggtggtcagttccttcagcagtcccatccccgagaacacagtgcctggcacggtggtt
gccctgttctcggtgagggaccgggattctggtgccaacgggaagatctcctgtgccctc
gaggatcagctctccttctccctgcggccagcctataagaattactatgagctggtgaca
gtgagcgcgctggaccgcgaggagatgcctcagtacatcctgagtgtcacggcagcagat
gcggggtcgcctcctctcacaagcacccagaccttcaccgtggacatctccgatgtcaat
gacaatgcccccgtcttcaaccagacctcctacaccatgtacgtgcgtgagaacaacgtc
cccacggtgtttgttggggccatcagtgctggggatgctgacgtggggctcaatgccaag
gtgacctattccctggcaccagagcaaggggcagagcggccctcgtgctcctgcatctcg
gtgaactctgagaacggacacgtgtttgtgctgcggcccctggactacgagcacttgagg
cagacggaggtgacggtcagtgcctgtgacgcgggctctcctcccctcagagccaacgtc
accgtccgcctggtcgtgctggacgagaatgacaacgctccgctcgtgctctacccggcc
caggacggcagcccagcgtccagcgagctggtgcccgtgtgggctgaggcgggctacctc
atcggcaaagtggtggccgtcgatgccgactcgggacagaactcctggctctcctaccac
ctgctgagggccaccgacccagggctgttttcggtggctgtccaaagcggggaggtgcgt
ctgaggaggccggtgacagagagagacagcgtgaagcagaagctggttgtcctggtcaga
gacaacggcaagcccccactgtcagccacggcagccctgagcgctctcctgctcaaggac
ttctcagacgtgcgcctcccgcacagcagcccggccccagaggatcaggacggctccctg
accacctatttaatcatttccttggtctttgtctcactgctcttcctcatctccagcgca
gtctttgtggctcgcaaggcgtgcaggagaaaggagctggaggctggccatgtgctctat
ggtgccgacaacttgcagagcggcctggccgatgcagccgctgcagggaccctgccccgc
gcctattgctacgagatcagcctcacaacgggctcgggcaacagcgagttcaaattcctc
aggcccatcctgcccagcctgcccccacagcactgcgccctgggccagggccccgatgag
gaacaggatttcccctgtgtccctgtcagcacagaggacatggccccagacaatgctggg
actctcactgcaggacagttcaacgcactttcctttgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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