KEGG   Taeniopygia guttata (zebra finch): 100226179
Entry
100226179         CDS       T01082                                 
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
  KO
K09299  zinc finger homeobox protein 1
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tgu03000]
    100226179 (ZEB1)
Transcription factors [BR:tgu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ZF
    100226179 (ZEB1)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-Di19 Homeodomain zf-met zf-C2H2_6 zf-C2HE zf-C2HC_2
Other DBs
NCBI-GeneID: 100226179
NCBI-ProteinID: XP_030120252
Ensembl: ENSTGUG00000001020
Position
2:complement(14630189..14755419)
AA seq 1116 aa
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHTVLPENSEREGSTNSCWEDEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENE
QNHDPNVEEFLKQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPANSCKNEKLPQDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGAEAEKPKSPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNTQPSAEELSKIADSVNLPLDVVRKWFEKMQAGQISVQSSGPSSPEQVKLSSPTDND
DQAATSTVSEPQNSTNNSQNPVSTTKSQTLPGASTLNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVHETPPKQTQANGNQDERHDTSSEGIPNLEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKRETEERDSAEPEELGPEVLGSELAAVTASPSQ
IDSQIDSDERESLTREEEEYSEKEEEEDEEKDIEGLQEEKECRELQEVGDAEEEAAVEEE
EGKNEGDKNDEAVNQASNEEPEVIQNNGQVSEENNE
NT seq 3351 nt   +upstreamnt  +downstreamnt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattataacaatgtggtagaagcaaactcagactcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacggatgcagcagactgtgatgctagcgtgccagaagat
gacttgccaacagaccatacagtattaccagaaaacagtgaaagagaagggagtacgaac
agttgttgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acagatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgag
caaaaccatgaccctaatgttgaagaattccttaaacaagaagatacagctgttatctac
cctgaagcacctgaagaggaccagagacaaggcacgccagaagctagtggtcaggatgaa
aatggaacacctgatgcgttttcccaactgctcacctgcccgtactgtgaccgggggtac
aagcgtttcacctctctgaaggaacacattaaataccgccatgagaagaacgaagataac
ttcagctgctccttgtgcagttacacgttcgcctacagaacgcagctcgaccgccacatg
acatctcacaaatcaggaagagatccaagacatgtgacgcagtctagtgggaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaaaatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattacgaattcaagcccatagtg
gttgcttcaggaattaattgttcaacccctttgcaaaatggggtttttagtggtggtagc
ccgttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggca
gtggatggtaatgtaataaggcaagtactggaaaacaatcatgctaatcttgcgtccaaa
gaacaagaaactatcaacaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattattatcaactacagcttg
gagcaaccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcct
gcaaatagttgcaaaaatgagaaattaccacaagatctcacagtgaagtctgagaaagat
aagaactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggagcagaagctgagaaacccaagtcccctgtcccatcagaaaccggggag
aacaacttgtctcctggtcagccacctttaaagaaccttctgtcgctcctaaaagcatat
tatgcattaaatacacaaccaagtgcagaagagctttcaaaaatagcagattctgtaaac
ctaccactagatgtggtaagaaagtggtttgaaaaaatgcaagctggacaaatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagtcccacagacaatgat
gatcaagcagcaacttcaactgtgagcgaaccccagaacagcacaaataactcacaaaat
ccagtcagtacaacgaaatctcagactttaccaggggcttcaactctgaatggttcccac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacggcagagggtgtacaagaagagccacaaatagaacctcttgacctttctcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactctactacagttagtcctgcagttcatgagacaccaccaaaa
cagacacaagccaatggaaatcaggatgaaaggcatgacactagctcagaaggaataccc
aatttagaagatcaaaatgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcatta
ttgagacataagtatgaacacacaggtaaaagacctcacgagtgtggaatctgtacaaaa
gcattcaaacacaaacaccatttgattgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcacactcggggtcttactctcagcacatg
aaccaccgctactcctactgcaaaagggagacggaggagcgcgacagcgcggagcccgag
gagctgggccccgaggtgctgggcagcgagctcgcggccgtcacggcgtccccctcgcag
atcgactcccagatcgactcggacgagagggagagcctaaccagggaagaggaggaatac
agtgaaaaagaggaagaggaggatgaagaaaaagacatagagggacttcaggaagaaaaa
gaatgtagggaactacaagaagtaggggatgcagaagaagaagcagcagtagaagaggaa
gaagggaaaaatgaaggtgacaagaacgacgaagctgtaaatcaagcaagcaatgaagaa
ccagaagttatacaaaataatgggcaggtgtcagaagaaaataatgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (40)   

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