KEGG   Taeniopygia guttata (zebra finch): 100227091
Entry
100227091         CDS       T01082                                 
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X39
  KO
K04936  potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    100227091 (KCNMA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tgu04040]
    100227091 (KCNMA1)
Ion channels [BR:tgu04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   100227091 (KCNMA1)
SSDB
Motif
Pfam: Slowpoke_C BK_channel_a Ion_trans Ion_trans_2 TrkA_N
Other DBs
NCBI-GeneID: 100227091
NCBI-ProteinID: XP_012429932
Ensembl: ENSTGUG00000006514
Position
6:12224840..12648853
AA seq 1187 aa
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESSILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCKACHD
DITDPKRIKKCGCKRLIYFEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNE
QIDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGL
RNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNI
NLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRT
SPDNSPVHGLLRQPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDS
NVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGAT
PELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKT
YNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASL
SHSSHSSYSSSKKSSSVHSIPSTANRPNRTKSRDSRDKQKYVQEDRL
NT seq 3564 nt   +upstreamnt  +downstreamnt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctctggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccaaaagatcaatggtggtggagatacacaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttcaat
gtgttcttcctactctactttggcttgcgttttatagcagccaatgacaagctatggttt
tggctagaagttaactcagtggtagatttcttcacggtccctccagtgtttgtgtcagta
tatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacagttt
tcagaaatcttgcagtttctgaatatacttaaaacaagtaattccatcaagctagtgaat
ctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtggag
aactcaggggatccatgggaaaatttccaaaataatcaaccgctaacttattgggaatgt
gtttatttgctgatggttacaatgtccactgttggctatggagatgtttatgcaaaaaca
acccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtgggcacataacacttgaaagtgtgtcg
aacttcctgaaggacttcctgcacaaggatagggatgatgtcaatgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaaacgacatttcactcag
gtggaattttatcagggttcagtccttaatccccatgacctggcaagagtgaagatagag
tcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaagat
gcctccaatattatgagagttatttccataaagaattatcatccgaagataagaattatc
actcagatgttgcagtaccacaataaggcccatctactaaatatcccaagctggaactgg
aaagaaggggatgatgcaatctgtcttgctgagctgaagctgggtttcatagcccagagc
tgcctggcaccgggcctttcaacaatgttagccaacctcttctctatgaggtcattcata
aagattgaggaggatacatggcagaaatactacctggaaggagttgcaaatgaaatgtat
acagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgagctggtg
ttcgcgaagctgaagctcttaatgatagccatagaatacaagtcggagaaacgcgaaagc
agtatattaatcaatcctggaaaccacgtcaagattcaagaaggtaccttaggattcttc
attgcaagtgatgccaaagaagtaaaaagggcatatttttactgcaaggcctgtcatgat
gacatcacagatcccaaaaggataaaaaaatgtggctgcaaacggctgatctattttgaa
gatgagcagccgtcaacactatcacccaaaaaaaagcagcgaaatggaggcatgcgaaat
tcacccaactcctcacccaaactgatgaggcatgaccccttgttaattcctggcaatgag
cagattgacaatatggatgccaacgtgaaaaaatacgactctacagggatgtttcattgg
tgtccagccaaagacatcgaaaaggttattttgactcgaagtgaagcagcgatgacagtt
ttaagtgggcatgtagtcgtttgcatatttggggatgttaaatctgctttgattggatta
agaaatttagtgatgccattacgagccagcaactttcactaccatgaactcaagcacatt
gtatttgtgggttcacttgaatacctgagaagggaatgggagacactgcataacttcccc
aaggtttcaatcttgcctggtacgccattaagtcgggctgatttaagggctgtcaacatc
aacctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcg
ctgcaggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgac
agcattggggtcttgcaggctaattcccaaggctttacaccccctgggatggataggacg
tctccagacaatagtccagtccatggccttttacgtcaaccctccattacaacaggagcc
aacatccctattataacagagctagctaagcctggcaaacttctgcctttggtttcaatc
agtcaggaaaaaaacagtggaacccacattctaatgataactgaactggtaaatgattca
aatgttcagttcttggaccaagatgatgatgatgaccccgacacagaactgtatctcacg
cagccttttgcatgtggaaccgcatttgccgtcagcgtgctggactctctcatgagcgca
acatacttcaatgacaatatcctcacactgatacggacattggtaacaggaggagccaca
ccagagctggaagcgctgattgccgaggaaaatgcattgagaggaggttacagcacgccc
cagacacttgcaaacagggacaggtgtcgagttgctcagctggctttgtatgatgggcca
tttgcagacctgggggatggaggttgttatggagatctgttttgtaaagcactgaaaaca
tacaatatgctttgctttggaatttatcgattaagggatgcacatctaagtactcccagc
caatgcactaaacgttatgttatcacaaacccaccgtatgaatttgagcttgtgccgacg
gacttgatcttctgtctgatgcaatttgaccacaacgctggccagtcccgagccagcctc
tctcattcctcccattcctcctactcttccagcaagaagagctcatcagttcactccatc
ccatcaacagcaaaccgaccgaaccgcaccaagagcagggattcccgggacaaacagaag
tatgtgcaggaagacagactttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (50)   
   RefSeq(pep) (50)   
DNA sequence (50)   
   RefSeq(nuc) (50)   
Protein domain (5)   
   Pfam (5)   
All databases (135)   

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