KEGG   Taeniopygia guttata (zebra finch): 100230084
Entry
100230084         CDS       T01082                                 
Symbol
PUS3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tgu03016]
    100230084 (PUS3)
Enzymes [BR:tgu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     100230084 (PUS3)
Transfer RNA biogenesis [BR:tgu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    100230084 (PUS3)
SSDB
Motif
Pfam: PseudoU_synth_1 WD40_alt
Other DBs
NCBI-GeneID: 100230084
NCBI-ProteinID: XP_012426234
Ensembl: ENSTGUG00000000778
UniProt: A0A674GFE4
Position
24:1887214..1893854
AA seq 461 aa
MAEESTATDHEQLLRRVQELEVEVKRLQEKLQEDKEGAGKREAPPAPGKGRKRQQRPFDF
AAHSRRHVALRIAYLGWGYQGFASQENTPNTIEEKLFEALKKTRLVDDRQTSNYHRCGRT
DKGVSAFGQVISLDLRSSLPEGQQLNGHGGEGQQEELRYTHILNRVLPPDIRVLAWAPVG
PEFSARFSCLSRTYRYFFPCAQLDVALMDTAAQRYVGTHDFRNLCKMDVANGVLNFQRTI
LRARVTRVNGGGAARPRDPFQLCQFEVTGQAFLYHQVRCMMAVLFLIGQGMESPDVIDEL
LNVEKNPRKPQYSMAVEFPLVLYDCEFPELQWLYDPEVQGFNVTHLQQLWASHAVKTHVL
RDMLAGLDAAPMATGKDPGSSLVPWGELQPPLHSQISGFLEGVQARSYKPLLARPRCEGL
EARIEHWVRRGRIEPPPGPEGKRGSGAAPEQLPKRICVDPE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggctgaggagagcacggctactgaccacgagcagctcctgaggagggtgcaggagctg
gaagtggaggtgaagcggttgcaggagaagctccaggaggacaaggagggtgctgggaag
agagaggctcctccagcccctgggaaaggcaggaaacgccaacaacggccctttgatttc
gctgcccacagccgcagacacgtggcactgcgcatcgcctacctgggctggggctaccag
ggctttgccagccaggagaacacccccaacaccatcgaggagaagctctttgaagccctg
aagaagacacggctggtggatgacagacagacgtccaactaccaccgctgcgggcgcacg
gacaagggtgtcagcgccttcgggcaggtgatctccctggatctccgctccagcctgcca
gaggggcagcagctcaacggccacgggggcgaggggcagcaggaggagctccggtacacc
cacatcctgaacagggtgctgccgcccgacatccgggtgctggcctgggcccccgtgggg
ccggagttcagcgcccgcttcagctgcctgagccggacctaccgctacttcttcccctgc
gcccagctggacgtggccctcatggacaccgcggcccagcgctacgtgggcacccacgac
ttccgcaacctctgcaagatggacgtggccaacggggtgctcaacttccagaggacgatc
ctcagggccagagtgacacgggtgaacgggggaggagcagccaggccacgggatcccttc
cagctgtgccagttcgaggtgacggggcaggcattcctgtaccaccaagtccgctgcatg
atggccgtgctcttcctcatcgggcagggcatggagagcccagatgtcattgatgagctg
ctgaacgtggagaagaacccccggaaaccgcagtacagcatggcggtcgagttccccctg
gtcctgtacgactgcgagttcccagagctgcagtggctctacgacccagaggtgcagggc
ttcaacgtgacacacttgcagcagctctgggccagccacgccgtcaaaacccacgtgctc
cgggacatgttggcagggctggatgctgctcccatggccacaggaaaagatccagggagc
agcctggtgccctggggggagctgcagcccccgctgcacagccagatcagcggtttcctg
gaaggggtgcaagcccgcagctacaagccgctgctggcccggccccggtgcgaggggctg
gaggcgcggatcgagcactgggtgcggaggggccgcatcgagccgcccccgggccccgag
ggcaagcggggcagcggcgcagcccccgagcagctgcccaagaggatctgtgtggacccc
gagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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