KEGG   Taeniopygia guttata (zebra finch): 100230741
Entry
100230741         CDS       T01082                                 
Symbol
LSG1
Name
(RefSeq) large subunit GTPase 1 homolog
  KO
K14539  large subunit GTPase 1 [EC:3.6.1.-]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100230741 (LSG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tgu03009]
    100230741 (LSG1)
Ribosome biogenesis [BR:tgu03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    100230741 (LSG1)
SSDB
Motif
Pfam: MMR_HSR1 RsgA_GTPase FeoB_N AIG1 cobW
Other DBs
NCBI-GeneID: 100230741
NCBI-ProteinID: XP_030136172
Ensembl: ENSTGUG00000009068
Position
9:13583679..13594919
AA seq 653 aa
MGKKRGDGLGRCLQRQRGLERRGASSWLHASELVAERGPELRSAPEQSPLEEFLATAELA
GTRFMAERLNAQIVSAQSCTGLLTAQEAQRVRQLHQENQEFLRIPRRPRWDRTTSAEDLK
QAERESFLEWRRQLAHLEEEKKLILTPFERNLEFWRQLWRVIERSDIVVQIVDARNPLLF
RCQDLESYVKEVSNDKENMILINKADLLSEEQRAAWAQFFENEGVKVVFWSALAECERLC
GESKELGAEGGAEHPSSSEDEGSSQEDDNTSQGSAGGVSTGSTWQRANQVLVSDDNSSDE
YEDCEDDEEEDWQTCSEDEAGDNINAVGPGRMENRTDGAAVQHRVQERNRNIRNFSHLVQ
RNELLEIFKTMHNGPRVKDGEVNVGLVGYPNVGKSSTINTILRNKKVSVSATPGRTKHFQ
TLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPVSLVCQHIPRNILEA
TYGINIIRPREDEDPDRKPTAEELLTAYGYMRGFMTAHGQPDQPRSARYVLKDYVSGKLL
YCHPPPGIDPNDFQHQHQRCPDSTTVQAAGQVKPEKNTKAKQIENVVDKTFFHQENVRAL
MKGVRAAMGYRPGSGLVPVTASNPANVVGKPWKKHGNRNRKEKIRRITKHLEA
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgggcaagaagcggggcgatgggctcgggcgctgcctgcagcggcagcgcgggctggag
cggcgcggcgcctcctcatggctgcacgccagcgagctggtcgccgagcgcggcccggag
ctgcggtcagcgcccgagcagagcccgctggaggagttcctggccacggccgagctggcc
ggcacccgcttcatggccgagcgtctgaacgcccagatcgtgtctgcccagagctgcacg
ggcctgctcacagcacaggaggcccagcgcgttcggcagctgcaccaggagaatcaggag
ttcctgcgcatcccacggaggccacgctgggataggacaaccagtgcagaggacttgaag
caagcagagagagagagctttctcgagtggaggcgacagcttgcccacctcgaagaagag
aaaaagttaattctaaccccatttgaaagaaacttggaattttggcgtcagctttggaga
gtcattgaaagaagtgatattgtagtccagatagtagatgccagaaaccctctcctgttt
agatgtcaagacctggaaagttatgttaaggaagtcagtaatgacaaggagaacatgatc
ctgatcaacaaagcagatttgctgagtgaggagcaacgtgctgcttgggcacagttcttt
gagaacgagggtgtcaaggtggtgttctggtcagctttggcagagtgtgaacggctgtgc
ggagaatcaaaggaactgggcgctgaggggggagcggagcacccgagcagttctgaggat
gaaggctccagtcaggaagatgataacacatcacaaggtagtgcaggaggagtgtccaca
ggcagcacttggcaacgtgcaaaccaggttctggtgagtgatgataacagcagtgatgaa
tatgaagactgtgaagatgatgaagaggaggactggcaaacctgttctgaagatgaagct
ggtgacaacataaatgcagttggtccgggaaggatggaaaacaggactgatggtgctgca
gtgcagcacagagtgcaggagcggaacaggaacatcaggaacttcagccatctggtacag
agaaatgagctgctggagatattcaaaactatgcacaatggaccaagggtgaaggatggg
gaagtaaatgttgggctggtgggttaccctaatgttggcaaaagttcaaccatcaacaca
atccttcgaaataagaaggtgtcagtgtctgctacaccaggccgtacaaaacacttccag
accctgtacgtggagcctggcctgtgcctttgtgattgccctggtctggtgatgccatct
ttcgtctctaccaaagcagaaatgatttgttctggaattctgcctatagatcaaatgagg
gaccatgttccacctgtttctctagtttgccagcatatcccacgaaacattttggaggca
acttatggaataaatatcatcaggccaagggaagatgaggacccagatcgaaagccaaca
gctgaagagctgctaacagcatatggatatatgagaggctttatgacagctcatggacag
ccagaccagccgagatcggctcgatatgtgttaaaagattatgtcagtgggaagctgtta
tattgccacccacctcctggtattgacccaaatgattttcagcaccaacatcaaagatgc
cctgacagtacaactgtgcaggccgctggacaggtgaagcctgagaaaaataccaaagca
aaacaaattgaaaatgtggtggacaaaacttttttccatcaggagaacgttcgtgccctg
atgaaaggggtccgggctgccatgggctaccggcctggcagcggcctcgtgcctgtgact
gcatccaatcctgccaatgtggtaggaaagccctggaaaaaacacggaaacaggaacagg
aaggagaaaatccgcaggatcacaaagcacctggaggcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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