KEGG   Taeniopygia guttata (zebra finch): 100230889
Entry
100230889         CDS       T01082                                 
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X3
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04120  Ubiquitin mediated proteolysis
tgu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100230889 (UBE4B)
   04120 Ubiquitin mediated proteolysis
    100230889 (UBE4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100230889 (UBE4B)
Enzymes [BR:tgu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100230889 (UBE4B)
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   100230889 (UBE4B)
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 100230889
NCBI-ProteinID: XP_012425896
Ensembl: ENSTGUG00000003533
Position
21:922058..953483
AA seq 1172 aa
MEELSADEIRRRRLARLAGGSSSQPSTPLTSPQRETPPGPPGAAPTPGPSHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPD
RSLILNMGSNPGSSPMFCNVGSFGSSSLSSVGGSGSSSVSDSCSDHFTIENCKETEMLNY
LIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLV
PYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSDNFKYPLMALC
ELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLGAFFSLSVFAEDDNKVVE
KYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGDTREAALSYMAAVVNANM
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKA
TMEEVAAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGM
VIQLMLRILDPAYPNIKLPLTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDP
FNRQTLTENMLEPVPELKEQIQAWMRDKQNDH
NT seq 3519 nt   +upstreamnt  +downstreamnt
atggaggagctgagcgcggacgagatccggcggaggcgcctggcgcggctggcggggggc
tcctcgtcccagcccagcaccccactgacgtccccgcagagagagaccccgccggggccg
ccgggcgcagcccccacgccggggccctcgcacagcctgggcctcaatgtgcacagcatg
accccagctacctctcccatcggggcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttccctcagcagttctccatccaacagccttgaaacccaatctcagtccctc
tctcggtctcagagcatggacattgatagtgtctcctgtgagaaaagtatgtcccaggta
gatgtggattcaggaattgagaacatggaggttgatgagaacgatcgcagagagaaacgg
agtctgacggacaaggaacctctgtcggggtcggaagtgtcagaggaacaagctctgcag
ctggtctgtaagatcttcagagtctcttggaaggaccgagacagagatgtcattttcctg
aattcactctctgcccagttcaagcagaacccaaaggaagtgttttcagattttaaggac
ttgatcgggcagattttgatggaagtgctgatgatgtccacccaggcaagggatgagaac
ccctttgccagcctgacagccacctcccaacccattgctgcagctgcccgctctcctgac
agaagcctgatcttaaatatgggctccaaccctggaagcagccccatgttctgtaatgtg
ggctcctttggttccagctcgttgtccagtgtgggaggctctggcagctcgagtgtttcc
gattcctgcagtgaccacttcaccattgaaaactgtaaggagacagagatgctgaactac
ctcattgagtgttttgacagggttggaatagaggagagaaaagcaccaaagatgtgtagc
cagccaacagttagccagttactgagcaacatcagatcccagtgcatttcacatgctgct
ttggtgctacagggatccttaacacaaccaaggtcattgcagcagcagtctctgctggta
ccatatatgctgtgtaggaatctcccatttggcttcattcaagagttggtgagaacaact
taccaggatgaagaggtgttcaaacagatctttattcccatcttacaaggcctggctgtg
gcttccaaagagtgctccctcgatagtgacaattttaaatatccccttatggcactatgc
gaactttgtgaaatcaagtttgggaaaacgcaccccatgtgcagtttggttgtctctttg
cccttgtggttgcctaaatctttaagcccaggtgcaggaagagaactgcaaagactttcc
taccttggagccttcttcagtctgtctgtctttgctgaagatgataacaaagtagttgaa
aagtacttctcagggcctgccattactcttgagaacacccgggttgttagccagtccttg
caacattacctggaattagcaaggcaagagctgttcaagatcctgcacagtatcctgctg
aacggggacacccgggaggcagctctcagctacatggcagctgtggtcaatgccaacatg
aaaaaggcccaaatgcagacagacgatcgtttggtgtccacagatggcttcatgctcaac
ttcctctgggtactgcagcaactgagtacgaagataaagctggaaacggttgatcccatg
tacatattccatcccaggtgtcgaatcgagcttcccacagatgagacaagagtgaaagca
acaatggaggaggttgcagcctggattgctgagctttacagggacccgtctccattttct
gagccgaagttcccaacggaatgtttcttcctgaccctgcacgcgcaccacctgtccatc
ctgcccagctgccgccgctacatccgcaggctgcgcgccatcagggagctcaacaggact
gttgaagatttgaaaaacaatgaaagtcagtggaaggattctcctctggccaccaggcat
cgagagatgctgaaacggtgcaagacacagctcaagaaactggtgaggtgtaaggcttgt
gcagatgctggtttgctggatgaaaacttcctcaggagatgcctgaatttctatggcatg
gtgattcagctgatgcttcgcattcttgaccctgcctatcccaacataaaattgccttta
actcctgaggttccgaaagtatttgcatcattgccagagttttatgtagaagatgttgct
gaatttttattttttattgtacaatatgctcctcaggtgctgtatgagccctgtactcag
gacatagtgatgttccttgttgtgatgctgtgcaaccagaactacatccgaaatccttat
ttagtagccaagctggtggaagtgatgttcatgacaaatccagctgttcagccccggaca
cagaagttctttgaaatgattgagaatcaccctctctccactaaattgttagtcccttcc
ttgatgaagttttacacagatgtggaacatactggagccactagcgagttctatgacaag
tttacaatccgctaccacatcagcaccattttcaaaagcctctggcagaatatagctcat
catggtacatttatggaagagttcaactctgggaagcagtttgtgcgctacatcaacatg
ctgataaatgacacaactttcttgctggatgagagtctggagtccctaaaacgtatccat
gaagtgcaagaggagatgaagaataaagagcaatgggacctgctgcccagggatcagcag
caggcccggcagtcgcagctggctcaggatgagcgcgtgtcccgttcatatctcgccctg
gccacagaaactgttgatatgttccatatccttaccaagcaggtccaaaagccttttctc
agacctgaacttggaccacgactggctgctatgttgaactttaacttacagcaactgtgt
ggccccaagtgccgtgacctgaaagttgaaaacccagagaaatatgggtttgaaccaaag
aagctgttggaccaactgactgacatttatctgcagctggattgtgctcgctttgctaaa
gcaattgctgatgatcagaggtcctacagtaaagagctctttgaggaggttatctccaag
atgaggaaggctggaatcaagtctaccatagcaatagagaaattcaaactgctggcagag
aaagtggaggaaatcgttgccaagaacgcccgtgcagagattgattacagcgatgctcca
gatgaattcagagatccgctgatggacactctgatgaccgacccggtgcggctgccctcg
ggcaccatcatggacaggtcaatcatcctgaggcacctgctgaactcctccaccgacccc
ttcaaccggcagacgctgacggagaacatgctggaaccagtgccagaacttaaagagcaa
atccaagcctggatgagagacaagcagaatgaccattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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