KEGG   Taeniopygia guttata (zebra finch): 100231784
Entry
100231784         CDS       T01082                                 
Symbol
EXO1
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100231784 (EXO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tgu03032]
    100231784 (EXO1)
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100231784 (EXO1)
DNA replication proteins [BR:tgu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100231784 (EXO1)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     100231784 (EXO1)
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2
Other DBs
NCBI-GeneID: 100231784
NCBI-ProteinID: XP_030124065
Ensembl: ENSTGUG00000010648
Position
3:complement(65465102..65482632)
AA seq 805 aa
MGIQGLLQFIKEAAEPSHVKKYQGMTVAVDTYCWLHKGAYACAEKLARGEPTDFYVAFCM
KFVHMLLSFGIKPILVFDGCTLPSKKEVEKARRERRQASLLKGKQLLQEGRLSEARECFG
RSVNITHAMAHEVIKAARAQGVDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGCK
KVFLKIDKFGNGLEIDQTRLGNCKQLGNVFTEEKFRYMCILSGCDYLPSIHGIGLAKACK
LLKLANNPDIIKVIKKMGQYLKMNLTVPEEYIQGFTRANNTFLYQLVFDPVNRKLVPLNA
YGDDIDPETLTYAGRHVGDDTAFQIAVGNIDINTMEQIDSYNPDTAQPVQQRSCGWNDRR
DNHVNSIWSREYKFGLTEDPAPPKVHFPEKPLTKGMEKIISVKGLKLAGKELFSKRPRSD
SEELSDGDLLKQYSFSKTKKIKKENDNDGQAQKSVSAIQNLDSSGISISQESSNSLPRIR
NKFASFLQRKNKEKDAVIVPGTRSRFFCNDAVMFDSRAKKEGGAQTQDAEQDCQIQEIKH
VAEDVSRFSETEKSPQTVFTPPGEMQKSSSQCFSSLKSNSGNLGPSQTVFSQQFHQQRNN
CIVSQEDQIDVAVCDESEEESSPLIELEQSSQSHGSCEPSECSLESSEILQVSSNSLGAK
ESDSSSKLNDDQCSLSLLFSAVQTNKRNTIIKTKVPGLRKSSNIRSHMATKLKPLIPAKV
SGLSRKMSPVQKRKDCDTENKLGLQSTIGELWKSFQFKREYEKLPSCRKSDPLSPIKDNI
QLTPETEEEIFNHLERSHVQRAIFQ
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgggcatccagggcctgctgcagtttatcaaggaggctgccgagccttcccacgtaaag
aaataccaaggaatgacggtggctgtggacacctactgctggctgcacaaaggcgcctat
gcttgtgctgagaagttggcccggggagagcccacggatttttatgtagctttctgtatg
aaatttgttcatatgctcctctcatttggaattaaaccaattttggtgtttgatggatgt
accctaccctctaagaaggaagtggaaaaggcacgacgagagaggcgtcaagccagtctt
ctgaaggggaagcaattgctgcaggaagggagactgtcagaagctagggaatgttttggg
cgaagtgtaaatattacccatgctatggctcatgaagttattaaagctgcacgagcccag
ggagttgattgtattgttgctccttatgaagctgatgctcagctggcatatcttaataag
actggcatggttcaagctataattacggaagactctgatcttttagcttttggatgtaaa
aaggtgtttctgaaaattgacaaatttggaaatggactagagatagatcaaactcgacta
ggaaactgcaagcagcttggaaatgtatttacagaagagaaattccgctacatgtgtatt
ctttctggttgtgactacctcccttcaattcatggaattgggttagctaaagcatgcaag
ttactaaaattagccaacaatccagatattataaaggttattaagaaaatggggcagtac
ttgaagatgaatctaacagtaccagaagaatacatacagggttttacacgagctaataat
acattcctgtatcagttagtttttgatcctgtcaacagaaaattagttcctctgaatgca
tatggagatgatattgatccagaaacactaacttatgcaggacgacatgttggtgatgat
actgcttttcaaattgctgttggcaatattgatatcaatacaatggaacaaattgacagc
tataaccctgacacggcacagcctgtgcagcagagaagttgtggctggaatgaccgacgt
gataatcatgtcaatagcatttggagcagagaatacaagtttggcctcactgaagatcct
gctcctcctaaagtgcatttcccagagaaaccattaaccaaaggcatggagaaaataatt
agtgttaaaggactaaagcttgcgggcaaagagctcttctcaaaaaggccaaggagtgat
tcagaagaactctcagatggagatctgttgaagcaatattcattttcaaaaacaaaaaaa
atcaagaaggagaatgataatgatggacaagcacaaaagagtgtgtcagcaatacaaaac
cttgattcttcaggaatttccatctctcaagaaagctctaactccctacccagaattaga
aataaatttgcttcctttttacaaaggaaaaacaaagagaaggatgctgtaattgttcca
ggaacaagaagcaggtttttctgcaatgatgcagttatgtttgacagtagagcaaagaag
gaaggtggtgcccaaactcaggatgctgagcaggattgccagatacaggaaataaaacat
gtagctgaagatgtttctaggttttcagaaactgaaaaatcaccacagactgtctttaca
cctcctggagaaatgcagaaaagttcttcccagtgctttagcagcctcaaaagtaactcg
ggaaatcttggtccatctcaaactgtattttcacagcagtttcaccaacagagaaacaac
tgcattgtatcccaggaagatcagattgatgtggcagtgtgtgatgaatcagaggaagag
tcctcccccttaatagaactggaacagtcatcacagtctcatgggtcttgtgagccatca
gaatgcagtttggagtcttcagaaatcctgcaagtatccagcaacagcttaggtgcaaag
gaatctgattctagttcaaaactgaatgatgatcaatgctctctgtctctgctattttct
gctgttcaaactaacaaaagaaatacaatcataaagaccaaggttcctggattacgtaaa
tccagtaatataaggtcacatatggcaacaaagctcaagccattgataccagctaaagta
agtggactaagcaggaaaatgtcacctgtgcagaagagaaaggactgtgatactgaaaat
aagctggggctacaatccactattggggaactctggaaaagcttccaatttaaaagagag
tatgaaaaacttccttcttgtagaaagtcagatcctttgtctccaatcaaagataatata
caactcactccagaaacagaagaggaaatctttaatcatctggaacgtagtcatgttcag
agagctatattccaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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