KEGG   Thalassotalea sp. PS06: FNC98_09975
Entry
FNC98_09975       CDS       T06100                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
thap  Thalassotalea sp. PS06
Brite
KEGG Orthology (KO) [BR:thap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thap03400]
    FNC98_09975
DNA repair and recombination proteins [BR:thap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FNC98_09975
    Archaeal homologous recombinant proteins
     FNC98_09975
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_21
Other DBs
NCBI-ProteinID: QDP01633
UniProt: A0A516HCZ0
Position
complement(2244087..2247167)
AA seq 1026 aa
MKFLTLSVQAFGPFADKQVIDFQKLGDAPLFLIDGPTGAGKSSILHAICFALYGETTDEA
RKDFAVRSDNANDDILTQVELTFTIRDKRYRITRTPTQLRPAKRGDGFTEEKASAHFCQF
LDDGTEVTLVAKKKKDADDMIREIIGLTVDQFRQVMVLPQGKFRELLLAKSDARQSILST
LFQTQIYQKIEQILKDKAALIKGDYEQLQEMINQALQEAEVQEISQLKSREEQQIQKLAE
LTASKQQLETQRQQAIVAYQEGKKLAEDFSEHTRLQHSQAEHLQRQQEMALQANKLQLSE
QAARIEPGFKVLQAQQADIKQLQTQITETEQLEAQTVENLQRSEQQLQAAQQQHQQRQPL
LDQQQKLVIFQETLAGFDVIKQECQQKSAAEQSARQNIEQAKAKIEEYSGRVKKGEALIQ
SLQLNVDKMPAAIEHQAMLEQQITASRQLQQLIDKQQSLNQEFGQRQTLVKQSQVLLETE
NKTLMTIEFQWHSSQAAILAAQLNPGDACPVCGSKEHPAPARLDAASGSQVVNKSMIDEQ
RARRDEKQQGLQNAQVDLAKIEQELNVCQAQQQQLIDSQKQTQGNGILPLEELEQTLAQH
RQIINGLKQDQQQLIKAGEKLRAMQTELQRLMANLQELEQALPALAADSATAAMKLADAE
KGLPEQYRDKSILDKAVNDNQQSLAKLDSQLAEAQQNFQKVSQDLSAIGSKKTTQLQHAE
QMQQKLQQLETQWQEQLTASHFDDQNAFLAACIDEFSLRRLQQDVSEYQQRAKTLADNLS
LLAERLKEKSAPDLSALQANLDNTDHQYQIHEKEVNQASIAVANSTNILKRIAEYQSRQE
QHREDYEVIGTLANAASGKGKVRVSLERFVLADILDNVLSIASQRLHIMSKGQYRLVRQA
EAQQKRNVTAGLDLAVDDAHTGKVRPVATLSGGESFMASLALALALSEVVQQRSGGIELD
TLFIDEGFGSLDHESLQLAINTLIDLQSTGRTIGVISHVNELKEQMAQRIDVRNDGGGSK
ISLSNM
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgaagtttttaaccctttcggtgcaggcatttggtccatttgccgataaacaggtgatt
gattttcaaaagcttggtgacgcgccactgtttttaattgatggtccaaccggggcaggt
aagtcctcaatcttgcacgctatttgttttgcattgtacggtgaaaccacggatgaagcg
cgtaaggactttgcggtacgctcggataacgctaatgatgacatacttactcaggtggaa
ctgaccttcaccattcgtgataagcgttatcgaattactcgtacaccaacgcaattgcgt
cccgccaagcgtggtgatggctttaccgaagaaaaagctagcgctcatttttgtcagttc
ctggatgatggcactgaagtcacgctggtcgcgaaaaagaaaaaagatgccgacgacatg
atccgcgaaattatcggtttaaccgtcgaccaatttcgtcaggtcatggtattgccacag
ggcaaattccgagaattactgttggccaaatcggatgctcggcaatcgattctatcaacc
ttattccaaactcagatttatcaaaaaatcgaacaaattctcaaagacaaagcagcctta
atcaaaggggattatgaacagctgcaggagatgattaatcaggcgttgcaggaagccgag
gttcaggaaatatctcagcttaagagtcgagaagaacagcagatacaaaaattagccgag
ttaactgcaagcaaacagcaactggaaacacagcgccaacaagccattgtcgcatatcag
gaagggaaaaaactggccgaggatttttctgagcatacccgattacaacactctcaggcg
gaacatctgcagcgacagcaggagatggcgctgcaggccaataagttgcaactctctgag
caagcggctcgaattgaaccaggctttaaggtcttgcaggctcagcaagcagatatcaaa
caactgcaaacgcagattaccgagactgagcagctagaagcgcaaacggttgaaaatttg
cagcgctcggaacagcagttacaagccgcccagcaacagcatcagcaacgccagcccttg
ttagatcaacagcaaaagctggtgattttccaggaaaccctggcgggctttgatgtcatc
aagcaggaatgtcagcaaaaatcagcagcagagcaaagcgccagacagaacatcgaacaa
gccaaggctaaaattgaagaatactcaggccgagtgaaaaaaggtgaagcgttaattcag
tctctgcaactcaatgtcgataaaatgccggcggcgatagaacaccaggcaatgcttgag
caacaaatcaccgcgagtcgacagttacagcagttaatcgacaagcagcagtccctgaat
caagagtttggccaacgccaaaccctggtaaaacaatctcaagtccttcttgagacagaa
aataaaaccttgatgaccattgagtttcaatggcacagctcgcaggcggcgattcttgct
gcgcaacttaatccgggcgatgcctgcccggtttgtggctccaaagaacatccggcaccg
gcgcgattagatgccgcgtctggtagtcaggttgtcaataaatcgatgatcgatgaacag
cgtgcccgccgtgatgaaaaacagcaagggctgcaaaacgctcaagtagatttggcaaaa
attgaacaggagctaaacgtttgtcaggcgcagcaacaacagctcattgattcacaaaag
cagacgcagggtaacgggattttacctctagaggaattagaacaaacgctggcgcagcat
cgtcaaataatcaatggccttaaacaagatcagcaacaactgatcaaggctggcgaaaag
ttgcgggcgatgcagacagaattgcagcggttaatggccaatctacaggaacttgaacaa
gcattgccagcgcttgctgccgacagtgcaaccgctgcgatgaaacttgcggatgcggaa
aaaggcttaccagaacaatatcgcgacaaatcgatattggacaaagcggttaatgataac
caacaatcattagcgaaattagatagtcagcttgcggaagctcagcaaaatttccagaaa
gtctctcaggatttaagtgcaatcggcagtaaaaaaacaacccaactgcaacatgctgag
caaatgcagcaaaaactgcagcaactggaaacgcaatggcaggaacagttaaccgcgagt
cattttgacgatcaaaatgccttcctggcagcgtgtattgatgagtttagtctgcgtcga
ttacagcaagatgtgagtgaatatcagcaaagagcgaaaacgctggcggataacttaagc
ttgctggccgagcgattaaaggaaaaatcggctcccgatttatcggcgttgcaggcaaac
ctggataataccgatcaccaatatcagatccacgaaaaggaagtgaatcaggcatcaatt
gccgtcgctaattcgaccaatattctaaaacgaattgctgaatatcagtctcgacaggaa
cagcatcgagaggattatgaagtgataggcacgttggcaaatgcggccagcggtaaaggc
aaagttagagtctctctggagcgttttgtgctggcggatattcttgataacgtgctatca
attgccagccagcgtttgcatattatgagcaaaggtcagtaccgattggtgcgacaggct
gaagcgcagcaaaagcgtaatgttactgctgggttagatttagccgttgatgatgcgcac
acaggcaaagttcgcccggtggcgactttatccggtggtgaatctttcatggcgtctttg
gctttagctcttgcgctctcagaagttgtacagcaacgctccggcggtatcgaattggat
accttgtttatcgatgaagggttcggcagtttagatcatgagtctttgcaattggcgatt
aataccttaatcgatttacagtccaccggccgcaccataggggttatctcccatgtaaat
gagctcaaagagcagatggcgcagcgtattgatgtacgcaatgatggtggtggcagcaag
atttctttgtcaaatatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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