KEGG   Thermus sp. CCB_US3_UF1: TCCBUS3UF1_18150
Entry
TCCBUS3UF1_18150  CDS       T01866                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
thc  Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:thc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thc03032]
    TCCBUS3UF1_18150
   03036 Chromosome and associated proteins [BR:thc03036]
    TCCBUS3UF1_18150
   03400 DNA repair and recombination proteins [BR:thc03400]
    TCCBUS3UF1_18150
DNA replication proteins [BR:thc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    TCCBUS3UF1_18150
Chromosome and associated proteins [BR:thc03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    TCCBUS3UF1_18150
DNA repair and recombination proteins [BR:thc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      TCCBUS3UF1_18150
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: AEV16855
UniProt: G8NA90
Position
1822535..1822783
AA seq 82 aa
MAAATNLKKKDVKAVVDAFLGKVEEALAGGNKVQLTGFGTFEVRKRKARTGVKPGTKEKI
KIPATQYPAFKPGKALKEQVKK
NT seq 249 nt   +upstreamnt  +downstreamnt
gtggcggcggccaccaacctcaagaagaaggacgtcaaggcggtggtggacgccttcctg
ggcaaggtggaggaggccctggccgggggcaacaaggtccagctcaccggcttcggcacc
tttgaggtgcgcaagcgcaaggcccgcaccggcgtgaagcccggcaccaaggagaagatc
aagatccccgccacccagtaccccgccttcaagccgggcaaggccctcaaggagcaggtc
aagaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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