KEGG   Thermus sp. CCB_US3_UF1: TCCBUS3UF1_430
Entry
TCCBUS3UF1_430    CDS       T01866                                 
Name
(GenBank) 60 kDa chaperonin 1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
thc  Thermus sp. CCB_US3_UF1
Pathway
thc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TCCBUS3UF1_430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thc03019]
    TCCBUS3UF1_430
   03110 Chaperones and folding catalysts [BR:thc03110]
    TCCBUS3UF1_430
   03029 Mitochondrial biogenesis [BR:thc03029]
    TCCBUS3UF1_430
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:thc04147]
    TCCBUS3UF1_430
Enzymes [BR:thc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     TCCBUS3UF1_430
Messenger RNA biogenesis [BR:thc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     TCCBUS3UF1_430
Chaperones and folding catalysts [BR:thc03110]
 Heat shock proteins
  HSP60 / Chaperonin
   TCCBUS3UF1_430
Mitochondrial biogenesis [BR:thc03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    TCCBUS3UF1_430
Exosome [BR:thc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TCCBUS3UF1_430
  Exosomal proteins of other body fluids (saliva and urine)
   TCCBUS3UF1_430
  Exosomal proteins of breast cancer cells
   TCCBUS3UF1_430
  Exosomal proteins of colorectal cancer cells
   TCCBUS3UF1_430
  Exosomal proteins of bladder cancer cells
   TCCBUS3UF1_430
SSDB
Motif
Pfam: Cpn60_TCP1 ATP-synt_Eps
Other DBs
NCBI-ProteinID: AEV15093
UniProt: G8NDP4
Position
complement(38734..40365)
AA seq 543 aa
MAKILVFDEAARRALERGVNAVADAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEIE
LENHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIE
KAVEAAVEKIRSLAIPVEDRKAIEEVATISANDPDVGKLIADAMEKVGKEGIITVEESKS
LETELKFVEGYQFDKGYISPYFITSPDTMEAVLEDAFILIVEKKVSNVRELLPVLEQVAQ
TGKPLLLIAEDVEGEALATLVVNKLRGTLNVAAVKAPGFGDRRKEMLKDIAAVTGGTVIS
EELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINAIKKELETTDSEYAK
EKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALSATRAAVEEGIVPGGGVTLLRA
ISAVDELLKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVVVQRILAETQNLRLGFN
AATGEYVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPAPASSGD
MDF
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggccaagatcctggtatttgacgaggcagcccgccgggctttggagcgcggcgtcaac
gcggtggccgatgcggtgaaggtgacccttggcccccggggccggaacgtggtcctggag
aagaagttcggctcccccaccatcaccaaggacggggtgacggtggccaaggagattgag
ctggagaaccacctggagaacatcggggcccagctcctcaaggaggtggcctccaagacc
aacgacgtggccggcgacggcaccaccaccgccaccgtcttggcccaggccatcgtgcgg
gagggcctgaagaacgtggccgccggggccaaccccctggccctcaagcggggcattgag
aaggcggtggaggccgcggtggagaagatccgctccctggccatccccgtggaggaccgc
aaggccattgaggaggtggccaccatctccgccaacgaccccgacgtcggcaagctgatc
gccgacgccatggagaaggtggggaaggaggggatcatcaccgttgaggagtccaagagc
ctggagaccgagctgaagttcgtggaggggtaccagtttgacaaggggtacatctccccc
tacttcatcaccagccccgacaccatggaggccgtcctggaggacgccttcatcctcatc
gtggagaagaaggtctccaacgtgcgcgaactcctcccggtgctggagcaggtggcccag
accggcaagcccctcctcctgatcgctgaggacgtggagggcgaggccctggccaccctg
gtggtgaacaagctccggggcaccctgaacgtggccgcggtgaaggcccccggcttcggt
gaccgccgcaaggagatgctcaaggacatcgccgcggtgacgggcggcaccgtgatctcc
gaggagctcggcttcaagctggagaacgccaccctctccatgctgggccgggccgagcgg
gtgcgcatcaccaaggacgaaaccaccatcgtgggcggcaagggcaagaaggaggacatc
gaggcccgcatcaacgccatcaagaaggagctggagaccaccgacagcgagtacgccaag
gagaagctccaggagcgcctggccaagctggcggggggcgtggccgtgatccgggtgggt
gcggccaccgagaccgagctcaaggagaagaagcaccgctttgaggacgccctctccgct
acccgggccgcggtggaggaggggatcgtgcctggcggcggcgtgaccctcctgcgggcc
atcagcgccgtggacgagcttctgaagaagctggagggggatgaggccaccggggccaag
atcgtgcgccgggccctggaggagcccgcccgccagatcgccgagaacgccggctacgag
ggctccgtggtggtgcagcggatcctcgccgagacccagaacctccgcctgggcttcaac
gccgccaccggggagtacgtggacatggtggaggcgggcatcgtggaccccgccaaggtg
acccgctccgccctgcagaacgccgcctccatcggtgccctcatcctcaccaccgaggcg
gtggtggcggagaagcccgagaagaaggagtccacccccgcgcccgctagcagcggggac
atggacttctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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