KEGG   Thermosynechococcus sp. CL-1: FFX45_10160
Entry
FFX45_10160       CDS       T06232                                 
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
thec  Thermosynechococcus sp. CL-1
Pathway
thec03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:thec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FFX45_10160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thec03021]
    FFX45_10160
   03400 DNA repair and recombination proteins [BR:thec03400]
    FFX45_10160
Enzymes [BR:thec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FFX45_10160
Transcription machinery [BR:thec03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FFX45_10160
DNA repair and recombination proteins [BR:thec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FFX45_10160
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 Cas9-BH
Other DBs
NCBI-ProteinID: QEQ01702
UniProt: A0A5C2M8B2
Position
complement(2058570..2060438)
AA seq 622 aa
MPRIEQRFDYVKVSLASPERIIQWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVTHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNSYVVLNPGNHPSLSYKQLLSEDQWQEIEEEIYSEDSEL
EGIEVGIGAEAIQRLLQDLDLQKEADQLRQEILNSKGQKRAKLIKRLRVIDNFIATGAKP
EWMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLQMHQCGLPREMAIELFQPFVIHRLIRQQIVNNIKAAKRMIQRNDPQIWDVLEE
VIEGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSI
EAQAEARMLMLASNNILSPATGKPIITPSQDMVLGCYYLTAENPKLPDYSDRYYANFQDV
VMAYEQGHLPLHAFVWVRYDGEVDDGDSSEPQITTYEDGSRLLEYSLRRVKEDANGQLIS
QYIRTTPGRIIYNQTIQEALAS
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgcccagaatcgagcaacgctttgattatgtaaaagtgtctctcgcgtcaccggagcgc
atcatccaatgggggcagcgcacgctccccaacggtcaagtggtgggcgaggtgactaaa
ccagaaaccattaactatcgcaccctcaagccagagatggacggcctcttctgcgagcgg
atttttggtcctgctaaggattgggagtgccactgcggtaaatacaagcgggtgcgccat
cgtggcattgtctgcgaacgttgtggcgttgaagtcaccgaatcgcgggtgcgccgccat
cgcatgggctacattaagttggctgccccagtgacccatgtttggtatctgaaggggatt
cccagctacatggcgatcctgctggatatgcccctgcgggatgtggagcaaattgtctat
ttcaattcctatgtagtgctcaatcccggcaatcaccctagcctcagctacaagcagctc
ctaagcgaagatcagtggcaggaaattgaagaagagatctacagcgaagactcggagcta
gagggtattgaggtgggcattggggctgaagccattcaacgcctacttcaggatttagat
ctgcaaaaagaggccgaccaactgcggcaggaaatcctcaactccaaggggcaaaaacgc
gccaagctcatcaaacggctgcgggtcattgacaacttcattgccactggagcaaagcca
gagtggatggttttgacggtaattcccgtgattccaccggatctgcggccaatggtgcag
ttagatggtgggcgctttgccacctctgacctgaatgacctgtaccgccgcgtcattaac
cgcaacaaccgccttgcccgcctgcaagagattctcgcccccgagattattgttcggaat
gagaagcgcatgcttcaagaggcggtggatgccctgattgataatggtcgtcgcggtcgt
acggtagtgggcgccaacaaccgtcccctgaagtccctttccgacattattgaggggaaa
cagggtcgcttccgccaaaacctgctggggaaacgggtggactactccggtcgttcggtg
attgtggtggggccaaaactgcaaatgcaccagtgcggcctgcctcgggaaatggccatt
gaactcttccagccctttgtgattcaccgcttgattcgccaacaaattgtcaacaacatt
aaggcagcgaagcggatgatccagcgcaatgacccccaaatttgggatgtgctagaggag
gtgattgagggtcacccggtgctgctcaaccgggcgccaaccctccaccgtttggggatt
caggcctttgagccaattctggtggaagggcgtgccattcaactgcaccccttggtgtgt
cctgccttcaacgccgactttgacggggatcaaatggcggtgcacgtccccctctcgatt
gaggcccaagcggaggcgcggatgctgatgctagcctcaaataatattctgtcgccggcc
acgggcaagccgattattacccccagccaagacatggttttgggctgctattacttgaca
gcagaaaatccgaagctgccagattatagcgatcgctactatgccaacttccaagacgtg
gtcatggcctacgaacagggacacttgccgctccatgcctttgtctgggtgcgctacgac
ggtgaggtggacgatggcgacagcagtgaacctcagattacgacctatgaagatggttcc
cgtttactggagtattccctgcggcgagtcaaggaggatgccaacggtcaactgatttcc
caatacatccgcaccacccccggtcgcatcatctacaaccaaacgattcaagaagcccta
gccagttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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