KEGG   Thermaerobacter sp. FW80: E1B22_09310
Entry
E1B22_09310       CDS       T05930                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
thef  Thermaerobacter sp. FW80
Pathway
thef03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:thef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    E1B22_09310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thef03400]
    E1B22_09310
Enzymes [BR:thef01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     E1B22_09310
DNA repair and recombination proteins [BR:thef03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     E1B22_09310
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_C
Other DBs
NCBI-ProteinID: QBS37936
UniProt: A0A4V1BEW4
Position
complement(2241204..2242388)
AA seq 394 aa
MAGGGPPIPRTWHELWCPGRLPPMLARRAPAPFSSPAYRFEVKWDGYRCLAFADPVLGRT
FLQSRHGHDLAPRFPELAGLHRLLPAAAVLDGEIVALVAGRPSFAALQRRAGGVRAAAGA
ARDRSAAIAPALFVVFDLLGLGGEVWLRRPLADRVHRLERLFPQGSAPGVALSRGVEGQG
EALFARVRDQGLEGVVAKRLDSPYLPGWRTDHWQKIKAERELEAVVGGVVPGGRAAGVGT
LLLGLYGPDGALHYVGDVSTGLGGEAIRHLLGRLRPRATCPFATVPARARHRPVVWVEPS
LVCEVTYLHWTPQGHLRHPVFRRWRDDRAPRDCRLPADAGHPAAGRDPDGPGDGPLGRGR
GLPGGSPRGRPGASPRERGEDLPGGNPRERGEDG
NT seq 1185 nt   +upstreamnt  +downstreamnt
gtggcgggcggagggccgcccatcccgcggacgtggcacgagctctggtgcccgggccgg
ctgccgccgatgctggcccgccgggcccccgcgcccttctcctcgccggcctaccgcttc
gaggtcaagtgggacgggtatcgctgcctggccttcgccgaccccgtcctgggacgcacc
ttcctccagtcccgccacggccacgacctggcgccgcgattccccgagctggccggcctc
caccgcctgctgccggcggccgcggtcttggacggggagatcgtcgccctggtggccggg
cggccctccttcgccgccctccaacgtcgggccggaggggtgcgcgcggcggccggcgcg
gcccgcgaccggtccgccgccatcgctccggcgctgttcgtcgtcttcgacctcctcggg
ctcggcggcgaggtctggcttcgccgcccgctggccgaccgcgtccaccgcctggagcgc
ctcttcccccaggggtcggcgcccggcgtcgctctctcccgcggcgtcgagggccagggc
gaggcgttgttcgcccgcgtccgcgaccaggggctggagggcgtggtggccaagcgcctg
gacagcccctatttgccgggatggcgcaccgaccactggcagaagatcaaggcggaacgg
gagctggaggcggtggtgggcggggtggtgcccggaggccgggcggccggggtggggacc
ctgctcctggggctctacggtccggacggggcgctgcactacgtgggcgacgtcagcacg
ggcctcggcggcgaggcgatccgccacttgctgggacgcctccgcccgcgggccacctgc
cccttcgccacggtgccggcgcgcgcccgccaccggccggtggtctgggtcgagcccagc
ctggtgtgcgaggtgacctacctgcactggacgccccaggggcacctgcggcaccccgtc
ttccggcgctggcgcgacgaccgggcgccgcgggactgccggctgcccgccgacgcgggt
cacccggccgcgggccgcgacccggacggtcctggcgacggcccccttgggcgagggcga
ggcctccccggagggagcccccgcgggcgccccggagcgagccctcgcgagcgcggggag
gacctccccggagggaacccccgcgagcgaggggaggacggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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