KEGG   Thermaerobacter sp. PB12/4term: DYI95_001605
Entry
DYI95_001605      CDS       T06418                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
thep  Thermaerobacter sp. PB12/4term
Pathway
thep03030  DNA replication
thep03430  Mismatch repair
thep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DYI95_001605
   03430 Mismatch repair
    DYI95_001605
   03440 Homologous recombination
    DYI95_001605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thep03032]
    DYI95_001605
   03400 DNA repair and recombination proteins [BR:thep03400]
    DYI95_001605
Enzymes [BR:thep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DYI95_001605
DNA replication proteins [BR:thep03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DYI95_001605
DNA repair and recombination proteins [BR:thep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DYI95_001605
SSDB
Motif
Pfam: DNA_pol3_alpha PHP DNA_pol3_finger HHH_6 tRNA_anti-codon HHH_3 T2SSK tRNA_anti_2
Other DBs
NCBI-ProteinID: QIA26401
UniProt: A0A8T8D4X8
Position
378932..382525
AA seq 1197 aa
MEPFVHLHVHSEYSLLDGAARVGELAARAAELGMPALALTDHGVMYGAIDFYKACKKHGI
KPIIGCELYLARRTRHDREPKLDDQPYHLLALAQNETGYRNLIRIVSRAYAEGFYYKPRA
DRELLAQYSEGLIVTSGCIGSEIPRLLLEGREEEALQAVRWYLEVFGDRFYFEIQDHGLP
EERRAYARILELARRFDVPVVATNDVHYLNRDDAAAHEVLLCIQTGKTLDDPNRMRFEGP
EFYLKTPEEMAALFRDVPEALANTVKLAERCQLEFEFGRFLLPHYEVPEGHDAASYLRYL
CESKLPERYPNAGSEVRDRLNHELEVITRMGYPAYFLIVWDFVDYARRNGIAVGPGRGSA
AGSLVAYVLGITDIDPLRYNLLFERFLNPERVTMPDIDIDFDDHRRDEVIEYVVRKYGRD
RVAQIITFGRMLARAVIRDVGRVMGLPYGEVDKIAKMVPAQLGITLDQALESSPELKQAY
DQQPVVRQLVDMARKLEGMPRHASVHAAGVVIGRDPLMEHVPLQRMQDGSTVTQFPMTTL
EELGLLKMDFLGLRTLHVIQETEQIIHQTGARDVLAEEPGPAGTGGPAGPGGAGGGPGGN
GTAARRAFRVRDIPLDDAATFEAMSRGDTAAMFQVESSGFTQMLRSLKPSSIEDLIAAVA
LFRPGPLGSGMVDDFIKRKHGQVPVEYPHPWLEPILKETYGTIVYQEQVMQIASVMAGFT
LGEADLLRRAMGKKKPEEMQKQREKFLAGAAAKGIDAELAGRIFDLMEYFAGYGFNKSHS
AAYGYLAYVTAYLKTHYPAPYMAATLSSVMSNSDRVAEYIAECRRLGIPVLPPDVNQSEA
RFTVVPDPGAPGGQAIRFGLAAVKNVGFGAIESIVAARQKGGPFRSLDDFCRRVDLRQVN
RRALESLIKAGAFDSLGQPRARLVAGLEEVMNRAQRWQKERETGQVSLLDLTAVLVGAGG
RGGGGGTGSGGAAAGDLEVTELPPVDEWPPNRKLAMEKEVLGLYLSGHPLAHYQRELARR
VTATTRQLADREDGARVQVGGLVQGIRRITTRGGDFMAFVQLEDLEGTVEVVVFPRTYAD
AAEALQEDAVIIARGRVDRREEEEPPKVVAEEIWPLVTGKRLVVALPDGGPDAVEGVLAR
VRGACQRHPGTSPVVLVFPGRDHALQVDAQYWVTPRAELLQDLARVVGDSGFYLDDH
NT seq 3594 nt   +upstreamnt  +downstreamnt
atggaacccttcgtccacctgcacgtccacagcgaatacagccttctcgatggcgccgcc
cgggtcggcgagctggccgcgcgggcggccgagctgggcatgcccgccctggcgctgacg
gaccacggcgtcatgtacggcgccatcgatttctacaaggcgtgcaagaagcacgggatc
aagcccatcatcggctgcgagctgtacctggcccggcgcacccggcacgaccgggagccc
aagctggacgaccagccctaccacctgctggccctggcccagaacgagacgggctaccgc
aacctgatccgcatcgtctcccgcgcctatgccgagggtttctactacaagccgcgggcc
gaccgggagctgctggcccagtacagcgagggcctgatcgtcacctcgggctgcatcggc
agcgagatcccgcggctgctcctggaggggcgggaggaggaagcgctccaggccgtgcgc
tggtacctggaggtcttcggcgaccgcttctacttcgaaatccaggaccacggcctcccg
gaggaacgcagggcgtacgcccgcatcctggagctggcccggcgcttcgacgtgccggtg
gtggcgaccaacgacgtccactacctcaaccgggacgacgccgccgcccacgaggtgctg
ctctgcatccagacgggcaagaccctggacgacccgaaccgcatgcgctttgaagggccg
gagttctacctcaagacgccggaggagatggccgccctgttccgggacgtgccggaggcc
ctggccaacacggtcaagctggccgagcgctgccagctggagttcgagttcggccggttc
ctcctgccccactacgaggtgccggaggggcacgatgcggcctcctacctgcgttacctg
tgcgaaagcaagctgcccgagcgttaccccaacgcgggcagcgaggtgcgggaccggctg
aaccacgagcttgaggtcatcacccgcatgggctacccggcctacttcctgatcgtgtgg
gatttcgtcgactacgcccgccgcaacggcatcgccgtgggaccgggccgcggctcggcg
gcgggcagcctggtggcctacgtgctggggatcaccgacatcgaccccctgcgctacaac
ctgctcttcgagcggttcctcaaccccgagcgggtcaccatgcccgacatcgacatcgac
ttcgacgaccaccggcgggacgaggtcatcgagtacgtggtgcgcaagtacggccgggac
cgggtggcgcagatcatcaccttcggccggatgctggcccgggcggtgatccgcgacgtg
ggccgggtgatgggcctgccctacggcgaggtcgacaagatcgccaagatggtcccggcc
cagctgggcatcaccctggaccaggccctggagtcgagccccgagctcaagcaggcctat
gaccagcagccggtggtgcgccagctggtcgacatggcccgcaagctggaggggatgccc
cgccacgcttcggtccacgccgccggcgtggtgatcggccgggacccgctgatggaacac
gtgcccctgcagcggatgcaggacggttccaccgtcacccagttccccatgaccaccctg
gaggagctgggcctgctcaagatggacttcctgggcctgcgcaccctgcacgtgatccag
gagaccgagcagatcatccaccagacgggggcgcgggacgtgctggcggaagaacccggc
ccggccggtacgggtggcccggccgggccgggcggggcgggtggcggccccggcgggaac
ggtaccgccgcccgccgggctttccgggtgcgggacatcccgctggacgacgcggcgacc
tttgaggccatgagccgcggcgacacggccgccatgttccaggtggagtcgtcgggattc
acccagatgctgcgatccctcaagccgtccagcatcgaggacctgatcgccgccgtagcc
cttttccgccccgggcccctgggcagcggcatggtggacgacttcatcaagcgcaagcac
ggccaggtgccggtcgaatacccgcacccgtggctcgagccgattctcaaggagacctac
gggaccatcgtctaccaggagcaggtcatgcagatcgccagcgtgatggccggcttcacc
ctgggcgaggccgacctgctgcgccgggccatgggcaagaagaagcccgaggagatgcag
aagcagcgggagaagttcctggccggggccgcggccaagggcatcgacgccgagttggca
ggccgcatcttcgacctgatggagtacttcgccgggtacgggttcaacaagagccactcg
gccgcctacggctacctggcctacgtgaccgcatacctcaagacccactacccggcgccg
tacatggcggccaccctgagcagcgtgatgagcaactccgaccgggtggcggaatatatc
gccgagtgccgccgcctgggcatcccggtgctgccgcccgacgtcaaccagagcgaggcc
cgcttcaccgtggtgcccgaccccggtgcacccggcggccaggcgatccgcttcggcctg
gcggcggtgaagaacgtgggcttcggcgccatcgagtccatcgtcgccgcccggcagaag
ggcgggcccttccgctccctggacgacttctgccgccgggtcgacctgcgccaggtcaac
cgccgcgccctggagagcctgatcaaggccggggccttcgacagcctgggccagccccgc
gcccggctggtggcgggcctggaagaggtgatgaaccgggcccagcgctggcagaaggaa
cgggagacgggccaggtgtccctgctggacctgacggcggtcctggtgggggcgggcggc
cgtggcggcggcggtggaaccggctccggcggcgccgccgccggcgacctggaggtcacc
gagctgccgccggtggacgaatggccgcccaaccgcaagctggccatggagaaggaggtg
ctgggcctttacctgtcgggccaccccctggcccactaccagcgggagctggcccggcgg
gtgaccgccaccacccgccagctggcggaccgggaagacggcgcccgggtccaggtgggc
ggcctggtgcaggggatacgccgcatcaccacccggggtggcgatttcatggccttcgtc
cagctggaagacctggagggaacggtggaggtggtggtcttcccgcggacctacgccgac
gccgccgaagccctgcaggaggatgcggtgatcatcgcccgcggccgggtcgaccgccgg
gaggaagaggaaccgcccaaggtggtggccgaggagatctggccgctggtgacgggcaag
cggctggtggtggccctgccggacggcgggcccgacgccgtggagggcgtgctggcccgg
gtgcgcggcgcctgccagcgccatccgggcacctcgccggtggtgctggtcttcccgggg
cgggaccacgccctgcaggtcgacgcccagtactgggtgacgccccgggcggagcttctg
caggacctggcccgggtggtgggcgacagcgggttctacctggacgatcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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