KEGG   Thermosipho sp. 1070: Y592_07805
Entry
Y592_07805        CDS       T04909                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ther  Thermosipho sp. 1070
Pathway
ther03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ther00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Y592_07805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ther03021]
    Y592_07805
   03019 Messenger RNA biogenesis [BR:ther03019]
    Y592_07805
Transcription machinery [BR:ther03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Y592_07805
Messenger RNA biogenesis [BR:ther03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Y592_07805
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 NACHT AAA_25 LRR_RI_capping
Other DBs
NCBI-ProteinID: ANQ54299
Position
complement(1504183..1505454)
AA seq 423 aa
MNVETFNIKDLEKMTIKELYKLAKEYDIARYTSMRKQDLIFAILEARAQSEGYFFGEGVL
EVHPDGFGFLRSMESMLPSSKDIYISNSQIRKFNLNTGDIISGVIRPPKENERFFAMIKI
EAINYKDPELANERVNFENLTPSYPDTQYILETDKDTLSTRIIDLFSPIGKGQRGMIVAP
PKAGKTTILKEIANGIARNYPDTIRIVLLIDERPEEVTDIKESVNAKVIAAPFDMPPDKQ
IKKAELTLEMAKRLVEYGHDVVILLDSLTRLARVYNINVPPSGKLLSGGVDPAALYKPKH
FFGAARNIKEGGSLTIIATSLIETGSKMDEVIFEEFKGTGNMELVLSRQLANKRIFPAIN
ITLSGTRKEELLLSMEQIKKIWLLRKMLSSMNEEEGLKLILNKLKETKSNDDFLALIDSQ
KGS
NT seq 1272 nt   +upstreamnt  +downstreamnt
ttgaatgttgaaaccttcaacataaaagatttggaaaagatgacaattaaagaattatat
aagttagcaaaagaatacgatattgcaagatatacctcaatgcgcaaacaagatttgata
tttgccattttggaagcaagagcccaatctgaaggttacttttttggagaaggagtactg
gaagtacaccctgatggttttggatttttaaggagtatggaaagtatgcttccaagttca
aaagatatatatatttctaattcacaaataagaaaattcaatttaaacacaggagatata
atttctggagttattcgtcccccaaaagaaaatgaaagatttttcgctatgattaaaatt
gaagcaatcaattataaagatccagaacttgcaaatgaaagagttaattttgaaaaccta
acaccttcttacccggatacccaatacatcctggaaacagataaagatacactttcaacg
agaataattgatctcttttcacctattgggaaaggtcaaaggggaatgattgtagcacca
cctaaagctggtaaaacaactattttaaaagaaatcgcaaatgggattgctagaaattat
ccagataccattagaatagttctgcttattgatgaacggcctgaagaagtaacagatatt
aaggaatcggtaaacgcaaaagttattgctgcaccttttgacatgccacctgataaacaa
atcaaaaaagcagaattaacacttgaaatggctaaaagacttgttgaatacggtcacgat
gttgtaatattacttgacagtctaacaagacttgcaagagtttataatattaacgttcca
ccaagtggaaaattattaagtggaggtgttgaccctgctgcactatacaaacctaaacac
ttctttggtgctgccaggaatataaaagaaggaggaagtttgacaataattgcaacttct
ttaatagaaactgggtctaaaatggatgaagtaatatttgaagaattcaaaggaacagga
aatatggaacttgtactctcaagacaacttgcgaacaaacggatttttccagcaataaac
attacattatctggtactagaaaagaagaattgttgctctcaatggaacaaataaaaaaa
atatggcttttaagaaaaatgctttcttctatgaatgaagaagaagggttaaagttaata
ctcaataaactaaaagaaacaaaatcaaacgatgacttccttgctttaatagattctcaa
aaggggagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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