KEGG   Thermoleptolyngbya sichuanensis: HPC62_04595
Entry
HPC62_04595       CDS       T06607                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
theu  Thermoleptolyngbya sichuanensis
Pathway
theu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:theu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPC62_04595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:theu03021]
    HPC62_04595
   03400 DNA repair and recombination proteins [BR:theu03400]
    HPC62_04595
Enzymes [BR:theu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HPC62_04595
Transcription machinery [BR:theu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HPC62_04595
DNA repair and recombination proteins [BR:theu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HPC62_04595
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_3 Apocytochr_F_C Biotin_lipoyl_2 RPOC_hybrid MethyTransf_Reg
Other DBs
NCBI-ProteinID: QKD81558
UniProt: A0A6M8B522
Position
complement(1054921..1058925)
AA seq 1334 aa
MTEQSSIQRSEKPVVFRNRVIDKKQLRRLIAWAFTHYGTARTAQVADELKDLGFKFATRA
GVSISVDDLQVPPSKRKLLDEAEDEIRKTEERYTRGDITEVERFQKVIDTWNSTNEDLTS
AVVRNFRESNPLNSVYMMAFSGARGNISQVRQLVGMRGLMANPQGEIIDLPIKTNFREGL
TVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIRELDCNTERGIPIRSMTD
GERVLIPLKDRLLGRVPAEDVIHPETGEVIVPRNEPISDDMAEEIGRAKVEQVVVRSPLT
CQASRSVCQRCYGWSLAHAYLVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGTVTGEQAP
TIRASFNGTVHLKLKRKDEVLRSRPFRTRHGEDALIIESPSVEVIVEQGSRKESHTITQG
SILFAQEGDSVVADQILAELPATGRVRKVTEKASKDVASDLAGEVKFADLVPEEKRDRQG
NITRIAQRGGLLWVLSGEVYNLPPGAEPVVKNGDRVEANSILAKTKLVTENGGTVRLPQD
GEGKAGREVEIITASVLLDQARVIAESQQGREHYIIETQHNQRFSLIATPGTKVVNKQVV
AELIDDRYHTQTGGIIKFSGIELEKRGKAKQGYEVVKGGTILWIPEESHEVNKDISLLLV
EDGQFVEAGTEVVKDIFCQSSGVVEVTQKNDILREIVIKPGELHMVDNPEAVMSRNGTIA
NPGEELLPGLELTDLRYVEYVDSPEGPALLLRPVTEFAVPDEPSVPSQSSTSEESGRAIQ
LRAVQRTMYKDGERVKSVEGLELLRTQLVLEIDQDAQLAADIELVPDESDPELLRLQLVI
LESLVIRRDVPADQTQGSTLTTLLVKDGDQISPGDEVARTEILCKEGGEVRGVGSNESAR
RILVVRESDKLTVETEGKSPTVKAGDLLVAGAAIADGVTVEESGQVLSVSDSQVQLRLAR
PYRVSAGAVLHIDDGDLVQRGDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEACVLA
RRPGTAQVVYSDDDTVQVKVVEADGVITEYPIGPGQNMLIIDGQEVGAAEPLTDGPANPH
EILEIFFDLHRETLGVHEASLISLEKVQTFLVNEVQSVYQSQGIEISDKHIEVIVRQMTS
KARVDDGGDTTMLPGELVELHQIQQVNEAMSITGGAPAEYTPVLLGITKASLNTDSFISA
ASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNAYEESTSVDLDALDDMGL
SDVVLDDLTARSYDLDSGFDVFPPPEGLGMREGTEFPRPSHGFGDDAFSGVLEDDELADE
YADDDDEDDDEDED
NT seq 4005 nt   +upstreamnt  +downstreamnt
atgacagagcaaagttcgattcaaagatccgagaagcccgtcgtgtttcgcaatcgcgtg
atcgataaaaagcagttgcggcgactgattgcctgggccttcacccactatgggaccgcc
cgcacagcacaggtagccgacgagctaaaggatttgggcttcaagtttgctacgcgggcg
ggggtgtcgattagtgtagacgacttgcaggttccgcccagcaagcgcaaactgctcgac
gaagccgaggacgaaatccgcaaaaccgaggagcgctatactcgcggcgacattactgaa
gtagagcgcttccagaaggtaatcgacacctggaacagcaccaacgaagacctaaccagt
gcggtggttcgcaacttccgcgagagcaacccgctcaactcggtctatatgatggcattt
tctggcgcacggggaaacatctctcaggtgcgtcagttggtggggatgcgcggcctgatg
gccaatccgcagggggaaattattgacctgcccattaagaccaacttccgcgaagggctg
acggtgacggagtacatcatctcctcctacggggcgcggaaaggactggtggacacggcg
ctgcggacggcggactccgggtatctcacccgtcgtctagtggacgtatcgcaggacgtg
attattcgggagctagactgcaacacggagcgcggcattcccatccgcagcatgacagac
ggggagcgagtgctgattcctctgaaggatcggctgctgggtcgcgtgcctgcggaggat
gtgattcatcccgaaacgggtgaagttattgttcctcgcaacgagccaatttccgacgat
atggcggaggaaattggtcgggctaaggtagagcaggtggtcgtgcgatcgcccctgacc
tgccaggcctcccgttccgtttgccagcgctgctatggctggagcctagcccacgcctac
ctggtggacatgggcgaagccgtgggcatcattgcggcgcagtcgattggcgaaccgggg
acgcagctgactatgcgaacattccacacgggcggcacggtcacaggcgaacaggctccg
accatccgcgccagcttcaacggcacagttcacctgaagctaaagcgtaaggacgaagtg
ctgcgctctcgccccttccgcacccgccacggcgaagacgcgctgattatcgagtcgccc
tcggtggaagtgatcgtggaacaaggcagccgcaaggagtcccacacgattactcagggt
tccatcctgtttgcccaggaaggcgattcggtcgtggccgatcaaatcctggcagaactg
cccgcgacggggcgtgtccgcaaggtgacggaaaaagccagtaaggacgtggcttctgac
ctggctggcgaggtgaaatttgccgacctcgtgcccgaagagaagcgcgatcgccagggc
aacatcactcgcattgcccagcggggcggcttgctgtgggtgctgtcgggcgaggtgtat
aacctgccaccgggcgcagaacctgttgtaaagaatggcgatcgcgtcgaagccaacagc
atcctcgccaagaccaagctcgtcaccgaaaatggtggtacagtgcgcctgccccaggat
ggcgaaggcaaagcggggcgcgaagtcgaaatcatcaccgcgtcggtgctgctggatcag
gcccgcgtcatcgccgaaagccagcaaggccgcgaacactacatcatcgaaacccagcac
aaccagcgattctccctgattgccacacccggcacaaaggtggtgaacaagcaggtcgta
gcggaactgattgacgaccgctaccacacccagacgggcggcatcatcaagttctctggc
atcgagctagagaagcgcggcaaggccaaacagggctatgaagtcgtcaagggcggcacg
attctctggattcctgaagaatcccacgaggtgaacaaagatatttcgctgctactggtc
gaagacgggcagtttgtggaagcgggcaccgaagtggtcaaagacatcttctgccagagc
agcggcgtagtcgaagtgacccaaaagaacgacattctgcgggaaatcgtgatcaagccc
ggcgaactgcacatggttgacaacccggaagccgtcatgagtcgcaacggcacgatcgcc
aaccccggcgaagaactgctgcccggtctcgaactgacggatctgcgctatgtcgaatat
gtcgattcgcccgaaggcccagcactgctgctgcgtccggtgacagagtttgctgtgccc
gacgaaccttcggtgcccagccaatcttcgaccagcgaggagtctggtcgcgcaatccaa
ctccgggcagtgcagcggacgatgtataaggacggtgagcgcgtcaagtcggtcgaaggg
ttggaactgctgcggactcagctagtgctggagattgatcaagatgcacaactggccgcg
gatatcgagctagtgcctgatgaatctgatcctgaactgctgcgcctccagttggtgatt
ctggaatcgctggtgattcgtcgcgacgtgcccgccgaccagacccagggcagcacgcta
accacgctgctggtgaaagacggggatcaaatctcgccaggagacgaagtggcccgcacc
gagatcctgtgtaaggaaggtggcgaggtgcgcggcgtgggcagcaacgaatcagcccgc
cggattctggtcgttcgcgagtcggacaagctgaccgtcgagacggagggcaagtcccct
actgtgaaagcgggcgacctgctggtggctggagcggcgatcgccgatggagtcaccgtt
gaagaatcgggacaagtcctctcggttagcgattcccaggtgcaactgcgactggcacgc
ccctatcgcgtgtcagcgggtgcggtgctgcacatcgacgacggtgatttggtgcaacgg
ggcgacaacctggtgctgctggtgtttgaacgcgccaagaccggagacatcatccagggt
ctaccccggattgaggaactgctggaagcccgcaagcccaaagaagcctgcgtcttggca
cggcgaccgggcacagcgcaggtggtctacagcgacgacgacacagtgcaggtgaaggtc
gtcgaagcggacggcgtaatcaccgagtatcccatcgggccgggtcagaacatgctgatc
atcgacgggcaggaagtgggtgccgctgaaccgctgacggacggccctgccaacccccac
gaaattctggagatcttctttgatctacatcgggaaacgctgggcgttcacgaagcctcg
ctgatcagcctggaaaaggtgcaaaccttcctggtaaacgaagtgcagtcggtgtatcag
tcgcaggggatcgaaatttcggataagcacatcgaggtaattgtgcgccagatgacctcc
aaggcgcgggtcgatgacgggggcgacaccaccatgctgccgggtgaactggtggaactg
caccagattcagcaggtgaacgaggcgatgtcgattacgggcggtgcgccagcggaatat
accccggtgctgctggggattaccaaggcctcactgaacaccgacagctttatctcggcc
gccagcttccaggaaacgactcgtgtgctgaccgaagcagcgatcgaaggcaagtcggac
tggctgcggggtctgaaggaaaacgtgatcattggtcgtctgattccagcgggcacaggc
ttcaatgcctacgaagagtccactagcgttgacctcgacgcgctggacgacatgggactg
agtgatgtggtgctggatgacctgaccgcccgcagctatgacctagacagcggctttgac
gtgttcccgccgccggaaggtctgggaatgcgagaagggactgagtttccgcgtccgtcg
cacggctttggtgacgatgccttctctggtgtccttgaggacgatgagctggccgacgag
tacgctgacgacgatgatgaggatgacgacgaggacgaagactag

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