KEGG   Thiomicrorhabdus sediminis: FE785_04425
Entry
FE785_04425       CDS       T05983                                 
Symbol
uca
Name
(GenBank) urea carboxylase
  KO
K01941  urea carboxylase [EC:6.3.4.6]
Organism
thig  Thiomicrorhabdus sediminis
Pathway
thig00220  Arginine biosynthesis
thig00791  Atrazine degradation
thig01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:thig00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00220 Arginine biosynthesis
    FE785_04425 (uca)
  09111 Xenobiotics biodegradation and metabolism
   00791 Atrazine degradation
    FE785_04425 (uca)
Enzymes [BR:thig01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.6  urea carboxylase
     FE785_04425 (uca)
SSDB
Motif
Pfam: CT_A_B CPSase_L_D2 Biotin_carb_N CT_C_D Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C Biotin_lipoyl_2 ATP-grasp HlyD_3 ATP-grasp_3 HlyD_D23 RnfC_N ATP-grasp_4 DksA_CC ATP-grasp_5 DUF2118
Other DBs
NCBI-ProteinID: QCU89932
UniProt: A0A4P9K4R1
Position
complement(974562..978209)
AA seq 1215 aa
MFKKVLIANRGAIATRIMRTLKKMNIASVALASDADRASLHVQQADEVIFLKGNTASETY
LNVPFILAEAKRLGVDAVHPGYGFLSENTTFASDCEAAGITFIGPTNEQIRDFGLKHTAR
ELAIKAKVPLLPGSGLLDSVEQALSEAERIGYPVMLKSTAGGGGIGMQKCDNAEDLNNAF
EQVKRLSQNSFGQAGLFLEKFVVHARHIEIQIFGDGQGNVVSFGERDCSLQRRNQKVVEE
TPAPGISREQVQQMEDYAIELCKLVNYKSAGTVEYVYDADSNEFYFLEVNTRLQVEHGIT
ETVRNVDLVEWMIKVAYDSKLPLSAEQIPAPQGHAIEVRVYAEDPFKNFQPSAGKITGWQ
MPSNCRVDTWCGRGIEVSSFYDPMMAKIIVKGESRESTISALQDALHETQIHGFETNVAY
LEALSHNDTFKVGAQLFTQFLNGFKHTPNTIEVTNPGTHSMLVSYPGRVGYWDIGVPPSG
PMDALSHRLANRCLNNPEDAATIEMTVSGISMKFDTDTMICITGADIKATLDKEPIAQNR
AIKVKAGQQLKSKVIKDIGQRAYLAVLGGFDVPDYMGSKTTFSLGGFGGHGGRLLRIGDV
LRVQNLDTQDELIKLPDNAIPTLGNLYEIAVIYGPQGCPDFFTEDDIENFFSAEWKVHYN
SSRTGIRLIGPKPQWARNSGGEAGLHPSNIHDNPYAIGAIDFTGDMPVILAQDGPSLGGF
VCPATIIEAEQWKMGQLRPGDKVKFKAVSTAEAERALKAQEAAILSLNDKVTPTLEFLDS
STEQSCIAFEQDHTQHEIGVKYRRSGDSHLLIEYGAMELDLALRFRIQVLFEKLRDLRDN
DNPAQKWAFLKDLTPGIRSLQVHYDPRQISQQDLLEKLIALESEVGSGKDLTVKSRIVHL
PLSWDDPSTRLAIEKYMTTVRPNAPWCPSNIEFIRRINGLDSIEDVKKIVFNANYLVMGL
GDVYLGAPVATPLDPRHRLVTTKYNPARTWTPENAVGIGGAYMCVYGMEGPGGYQFVGRT
IQMWNAYFQTQNFSSDKPWLLDFFDQIKFYPVSEEELKQARLDFPLGRFDIEIEETELSL
NAYQQFLAENDDSIGEFQDTQQAAFEAERLYWEESGLANFESDTEQEELQADAPLQIPEG
FAAANSPITGSVWKLQVKPGDRVEEDQVIAILETMKIEIPVNAEFSGTVSEILVNEGDLI
QTGQALMVLKEDTHA
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgtttaagaaagtactcattgccaaccgcggcgccatcgccacccgtattatgcgcacg
ctgaaaaagatgaatatcgcttcggtcgccctcgcctcagatgcggatcgtgcgtcatta
catgttcagcaagccgatgaagtcatctttcttaagggtaataccgcctcggaaacctat
ctgaatgtcccgtttattcttgccgaagcaaaaaggcttggcgtcgatgcggtccacccg
ggttacggttttttaagcgaaaacaccacttttgcctcggattgtgaagccgccggtatc
acctttatcggcccgaccaatgaacagattcgagatttcggcctgaaacacaccgctcgc
gaacttgcaatcaaagccaaggtgcctttactgccgggttcgggtctactggattctgtt
gaacaggctttaagcgaagcagagcgcatcggttatccggtcatgctcaaaagtaccgcc
ggtggtggcggtatcggtatgcaaaaatgtgacaatgccgaggatttgaataatgcgttt
gaacaggtcaaacgtttgagccagaactctttcggtcaagccggtttgttcctggaaaaa
ttcgttgtccatgcacgccatatcgaaattcagattttcggtgacggtcaaggtaatgtc
gtgtctttcggagaacgtgactgttctttacaacgccgtaaccagaaagtggttgaagaa
actcccgcaccgggcatcagccgtgagcaagtccagcagatggaagattatgcgatcgag
ttatgtaaactggtcaattataaatcggccggtaccgtcgaatatgtctatgatgccgac
agcaatgagttctatttccttgaggtgaatacccgattgcaggtggaacacggtattacc
gaaacggtgcgcaatgtcgatttggtcgagtggatgatcaaagtcgcctacgattcgaaa
ctgcctttatccgccgaacagattccagcgccgcaaggtcacgccattgaagtgcgtgtt
tatgctgaagatccatttaaaaacttccagccaagtgccggaaaaatcaccggctggcaa
atgccaagcaactgccgtgtcgatacttggtgtggtcgcggcatcgaggtcagttcgttt
tatgatccgatgatggcgaaaatcattgttaaaggcgagagccgtgaaagcacgatcagc
gctttgcaagacgcattgcatgaaacgcagattcacggctttgaaaccaatgtcgcttat
cttgaagcgcttagccataatgatacctttaaagtcggtgctcagctgttcacccagttc
ttgaacggttttaaacacaccccaaatacgattgaggtcactaatccgggaactcactct
atgctggtgagctatccggggcgagtcggctattgggatatcggtgtgccaccatcaggg
cctatggatgcgctttcccatcgtttggcgaaccgttgcctaaacaacccggaagatgcc
gcgaccattgaaatgacggtatcgggtatcagtatgaaattcgataccgatacaatgatc
tgtattaccggtgccgatattaaagccaccctggataaagagccgattgcccaaaaccgg
gcgattaaggtcaaagccggtcaacaactgaaatcaaaagtcattaaagatatcggtcaa
cgcgcctatctggcagtattaggcggctttgatgtgcccgattatatgggcagtaaaacc
accttctctttaggcggcttcggtggtcacggtggtcgcctgttacgtattggtgatgtg
ttgcgtgtacagaatctagatacacaggatgaactgattaaactacctgacaacgctatt
ccaactttaggcaacctgtatgaaatcgcagtcatttacggtccgcaaggctgcccggac
ttctttaccgaagacgatatcgaaaacttcttctctgccgaatggaaagtacattacaac
tcaagccgtaccgggattcgattgattggcccgaaaccgcaatgggctcgcaacagtggt
ggtgaagccggcctacacccttccaatatccacgacaatccctatgccatcggtgcaatc
gatttcaccggtgatatgccggtgattctcgcgcaagacggtccaagcttaggggggttt
gtctgcccagccaccattatcgaagccgaacaatggaaaatggggcaactgcgcccgggc
gacaaggtcaagttcaaggcggttagtacagcggaagcggaaagagcgttaaaagcccaa
gaagcggcaattctctcactaaatgacaaggtcacgcctactctagagtttttagacagt
tcaaccgaacaatcctgcattgcttttgaacaggaccatacgcaacatgaaatcggcgtt
aaataccgccgttccggcgactctcaccttctcatcgaatatggagcgatggaactggat
ctggcgttgcgtttccgtattcaggtgttgttcgaaaagctgcgtgatttgcgtgataac
gacaacccggcgcaaaaatgggcgtttttgaaggacctgacaccaggtatccgttcgttg
caggtgcattacgacccaagacaaatctcacaacaagatttactggaaaaattgattgcg
ctggaaagcgaagtcggttccggtaaggacctgacggtaaaaagtcgcattgttcatctg
ccgttatcttgggatgatccgagcacacgtttggcaattgaaaaatacatgaccacggtc
cgtcctaatgccccatggtgtccgagcaatatcgagtttatccgccgaattaacggcttg
gacagcattgaagatgtcaaaaagattgtctttaacgccaactatctggtgatgggcttg
ggtgatgtctatctgggcgctccggttgcaaccccgcttgaccctcgtcaccgtctggtc
accaccaaatacaacccggcacgaacctggacaccggaaaacgccgtcggtatcggtggt
gcctatatgtgcgtttacggtatggaaggcccgggcggttatcagtttgtgggtcgcacc
atccagatgtggaacgcctatttccaaacacagaacttcagttccgacaaaccttggtta
ttggatttcttcgatcagattaaattctatccggtcagtgaagaagaactgaaacaggca
cgtctcgatttccctctgggacgttttgacattgaaatcgaagagaccgaactgtcattg
aatgcttatcagcagttccttgccgaaaacgacgacagcattggcgaattccaagacact
cagcaggccgcattcgaagccgagcgtttgtactgggaagaatcaggattggcgaacttc
gaatcggacaccgaacaagaagaattgcaagccgatgcacctttacagattccagaaggg
tttgccgcggccaattcgccgattaccggcagtgtctggaaactgcaagtcaaaccagga
gaccgcgtcgaagaggaccaggtgatcgccattttggaaaccatgaaaatcgaaatccct
gtcaatgccgaattcagcggcacagtaagcgaaattttagtgaatgaaggcgacctgatt
caaaccggtcaggcactgatggtattaaaggaagacacccatgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (34)   

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