KEGG   Candidatus Thiothrix singaporensis: HZT40_03985
Entry
HZT40_03985       CDS       T06729                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
this  Candidatus Thiothrix singaporensis
Pathway
this00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:this00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HZT40_03985 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:this01007]
    HZT40_03985 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:this03016]
    HZT40_03985 (lysS)
Enzymes [BR:this01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     HZT40_03985 (lysS)
Amino acid related enzymes [BR:this01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   HZT40_03985 (lysS)
Transfer RNA biogenesis [BR:this03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HZT40_03985 (lysS)
 Prokaryotic type
   Other AARSs
    HZT40_03985 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: QLQ30902
UniProt: A0A7L6AP75
Position
complement(782875..784380)
AA seq 501 aa
MSEQEXPQDHADENKLITQRREKLAKLREQGVPFPNDVVRADKAADLHTQYGEQDKPWFE
ENAVEVTVAGRMMLKRLMGKASFATISDVSGRIQLYSQKNVLGDEVFDAYTHWDLGDIVX
ARGTLFRTKTGELSVKVQEIRLLTKSLRPLPEKFHGLTDHEQRYRQRYLDLIMNQETRDA
FVLRSKIVSYIRNFFTQRDFLEVETPMLQVIPGGATARPFITHHNALDLPMYLRIAPELY
LKRLVVGGFERVFEINRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMDLTEELMRGLAM
DVIGSATVTYQGEAFDFSQPFARMSVRDSILHFNPAVTPEQVDTLDGAKAVAAKLGIPLK
GSYGLGKIQIEIFEKTVEHRLLQPTFITEYPAEVSPLARRNDTNPFITDRFEFFVGGREI
GNGFSELNDAEDQAERFLKQVEEKDAGDDEAMHYDADYVRALEYGMPPTAGQGIGIDRLV
MLFTDAPSIRDVILFPHMRPE
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgagcgaacaggaanttccccaagaccacgccgacgaaaacaaactgatcacgcaacgc
cgcgaaaaactggcgaagctgcgtgagcagggcgtcccgttccccaatgatgtggtgcgg
gcggacaaggccgctgacctgcacacgcagtatggcgaacaggacaagccgtggtttgag
gaaaacgcggtggaagtgaccgtcgccgggcgcatgatgctcaagcggctgatgggcaag
gccagtttcgccaccatttccgacgtgtccgggcgcatccagttgtattcccagaaaaat
gtgctgggcgacgaagtgtttgacgcttacacgcactgggatttgggcgacattgtgnta
gccagggggacgctgttcaggaccaagaccggcgagctgtcggtgaaagtgcaggaaatc
cgcctgctgaccaaatccttgcgcccgttgccggaaaagttccacggcctgaccgaccac
gagcagcgctaccgccagcgctacctcgacctgatcatgaaccaggaaacgcgcgacgca
ttcgtgctgcgttccaaaatcgtcagttacatccgcaatttcttcacccagcgcgacttc
ctggaagtggagacgccaatgttgcaggtgattccgggcggggcgacggcgcggcctttc
atcacccaccacaatgcgctggatttgccgatgtacctgcggattgcgccggagctgtac
ctcaagcggctggtggtgggcggtttcgagcgcgtgtttgaaatcaaccgcaacttccgc
aacgaagggctttccacccgccataacccggaattcaccatgatcgaattctatcaggcg
tatgcgacctaccacgacctgatggatttgaccgaggagctgatgcgcgggctggcgatg
gacgtgattggcagcgcgacggtcacctaccagggcgaagcctttgacttcagccagccg
tttgcgcgcatgagcgtgcgcgactccattttgcatttcaacccggctgtcacgcctgag
caggttgacacgctggatggggcgaaagccgtcgccgccaaattgggcatcccgctcaag
ggcagctacgggttgggcaagatccagatcgaaatctttgagaaaacggtcgagcaccgt
ttgctgcaaccgaccttcatcaccgaatacccggcggaagtgtcgccactggcgcgccgc
aatgacaccaacccgttcattaccgaccgttttgagtttttcgtcggcgggcgtgaaatc
ggcaacggcttctccgagctgaatgacgcggaagaccaggccgaacgcttcctcaaacag
gtggaagaaaaggacgcaggcgacgatgaggccatgcactacgacgctgattacgtgcgc
gcgctggaatacgggatgccaccgaccgctggccagggcatcggcatcgaccggctggtg
atgctgttcaccgacgcgccgtcgatccgtgatgtgatactgtttccgcacatgcgccca
gaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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