KEGG   Tarenaya hassleriana (spider flower): 104798988
Entry
104798988         CDS       T04125                                 
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    104798988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:thj04121]
    104798988
   03036 Chromosome and associated proteins [BR:thj03036]
    104798988
Ubiquitin system [BR:thj04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104798988
Chromosome and associated proteins [BR:thj03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     104798988
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 104798988
NCBI-ProteinID: XP_010519573
Position
Unknown
AA seq 346 aa
MENSAQDSRSRSETAVTYDSPYPLYAMAFSSSRGGGAAATNSHRIAVGSFVEDYNNRVDI
LSFDSDALTVTAFPNLSFEHPYPPTKLMFSPPSLRRSSAGDLLASSGDFLRLWEIREDSS
SVEPVSVLNNSKTSEFCAPLTSFDWNEVEPKRLGTCSIDTTCTIWDVEKCAVETQLIAHD
KEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYM
ATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSAGDDTQALIWELP
TVAGPNGIDPMSVYSAGSEINQLQWSASQPDWIGIAFSNKMQLLRV
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggagaactcagctcaggattctcgatccagatcggagaccgccgtcacctacgattct
ccgtatcccctctacgccatggccttctcctcctcccgcggaggcggcgctgccgccacg
aacagccaccgcatcgccgtcggaagcttcgtcgaggactacaacaaccgcgtcgacatc
ctctccttcgattccgatgccctaactgtgactgctttccccaatctctccttcgagcat
ccttatcctccgaccaagctcatgttcagtcctccctccctccgccgctcatccgctggc
gatctgctcgcctcctccggcgatttcctccgtctttgggagatccgcgaggattcctcc
tcggtggagcccgtctccgttctcaacaacagcaagacgagcgagttctgcgcgccgctg
acctccttcgactggaacgaggttgagccgaagcggctcgggacttgcagcatcgacacc
acctgcacgatttgggacgtcgagaagtgcgccgtggagacgcagctcatcgcgcacgac
aaggaggtccacgacatcgcctggggcgaagctagggttttcgcctccgtctccgccgat
ggatctgtcagaatcttcgatctccgcgacaaggaacattccaccatcatctacgagagt
ccgcaacccgatacgccgcttcttagactcgcttggaacaaacaagacctgagatacatg
gcaacgattctgatggattccaacaaggttgtgattctggacattcgatctccgacgatg
ccggtggcggagctggaacggcaccaggcaagtgtgaacgccatagcttgggctccacag
agctgcaagcacatctgctcggccggggatgacacacaggcgctcatatgggagctgccg
acagtagctggaccaaacggcatcgatccgatgtctgtttactctgctgggtcggagatt
aaccagttgcagtggtcggcttcacagcccgattggatcggcatcgccttctctaacaaa
atgcagttgctgagggtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system