KEGG   Tarenaya hassleriana (spider flower): 104800255
Entry
104800255         CDS       T04125                                 
Name
(RefSeq) WD repeat-containing protein RUP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj04120  Ubiquitin mediated proteolysis
thj04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104800255
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    104800255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:thj04121]
    104800255
Enzymes [BR:thj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104800255
Ubiquitin system [BR:thj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104800255
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104800255
SSDB
Motif
Pfam: WD40 WD40_like
Other DBs
NCBI-GeneID: 104800255
NCBI-ProteinID: XP_010521332
Position
Unknown
AA seq 444 aa
MEALLCPEIIPNIRSSIDDLSPSFEWPMKSLSSLAPMESSDKGDKDVDKPRCEWNLSLSA
AIVASGSAKTAPSDAIGAIEFDSTGEILATGGISRKIRFYRMSSFPDSPTVVLDHGEVLQ
FCICTPAKLSSLRWRPDSSNRVIGSGDYDGVVTEYDAEKRVPVFERDEHGGRRVWSVDYT
RYTGSVIGASGSDDGTVQMWDSRAAESGSAEPSKIRPGGGSAICSVEFDPTGGPSLAVGC
ADRCAYVYDIRRLVDPVVALEGHSKTVSYARFLDPRTVVTASTDGSLKTWDVSEGRRVVR
TYRGHVNSRNFVGLSVWRHGGLLASGSEDDNVVVYDTRWGDPVWIHRFGVGSGHTGRVGT
DRQFVSSVCWRQVGEDGCVLVAGGSDGVLEVTTFYGSTAVFNVVRSTTFMGVWISERHGP
MTIMNRKISKRIGLETGGPCMASW
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggaagccttgctttgccccgaaatcatccccaacatcagatcatccattgatgatctt
tctccttcattcgaatggccgatgaagagcttgtcgtctcttgcacccatggaatcatca
gacaaaggagataaagatgtggacaaacccagatgcgagtggaatctgtctttgtccgcc
gccattgtcgcctccggctccgccaagacggcgccttcggacgccatcggagcaatcgag
ttcgactccacgggagaaatcttagccaccggaggaatctccaggaaaatccgattctat
cgtatgagctcgttcccagattctccgacagtagtgttagatcacggcgaggtactccag
ttctgcatctgcactccggcgaaattgagcagcctcagatggaggcccgattcgagcaat
cgggtaatcgggtcgggcgattacgacggcgtcgtgacggagtacgacgccgagaagcga
gtccccgtcttcgagagagacgagcacggaggccgacgcgtgtggagcgtcgactacacg
cgctacacgggctcggttatcggtgcgtcgggctctgacgacggaacggtgcaaatgtgg
gactcacgagccgccgagtccggatcggccgagccgtcaaagatcagacccggtggtgga
tcagcgatctgctccgtcgagttcgatccaaccggtggaccatccttggccgtcggatgc
gctgaccggtgtgcttacgtgtacgacatccgacggctcgttgaccccgtcgtggcactt
gagggtcatagcaaaacggtgtcgtatgctcggttcctggatcctcggaccgtcgtgacg
gcttcaacggacgggtcgttgaagacatgggacgtgtccgagggccggcgcgtggttcgc
acgtacagagggcacgtgaacagccgcaactttgtggggttgtcggtgtggagacacggg
ggtttgcttgcgtccggttcggaggatgataacgtggttgtgtacgacacgagatgggga
gacccggtttggatccaccggttcggagtcgggtcgggtcatacaggtcgggtcgggacg
gaccggcagttcgtgagcagcgtgtgttggagacaagtgggtgaagacgggtgcgtcctc
gttgccggaggatccgacggtgttttagaggttacaactttttatgggtccactgctgtt
ttcaatgtcgtccgttcgacgacattcatgggagtttggatatctgaacgccacggtccg
atgacgatcatgaatcgcaaaatctcgaaaagaatcggattggaaaccggaggtccatgc
atggcttcttggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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