KEGG   Tarenaya hassleriana (spider flower): 104811465
Entry
104811465         CDS       T04125                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104811465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104811465
   03041 Spliceosome [BR:thj03041]
    104811465
   03032 DNA replication proteins [BR:thj03032]
    104811465
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     104811465
Spliceosome [BR:thj03041]
 Complex A
  U1 snRNP components
   Sm proteins
    104811465
  U2 snRNP components
    104811465
 Complex B
  U1 snRNP components
    104811465
  U4/U6.U5 tri-snRNP components
    104811465
 Complex C
  U2 snRNP components
    104811465
DNA replication proteins [BR:thj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     104811465
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 104811465
NCBI-ProteinID: XP_010536464
Position
Unknown
AA seq 130 aa
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSSSLGVGRGRAVAMRAKAAGRGGTG
GRGAVPPVRR
NT seq 393 nt   +upstreamnt  +downstreamnt
atgagtcgcagtttgggaataccggtgaagctccttcacgaggcctccggtcatgtcgtc
actgtggagctgaagagcggtgagctttacagaggaagcatgatcgagtgtgaggataac
tggaactgtcagctcgagaacatcacctacaccgccaaggatggtaaggtgtctcaactt
gagcatgtcttcatcagaggcagcaaagtcaggtttatggtcataccagacatgctgaag
aatgctccgatgttcaaacgtttagatgctagaattaagggtaagagctcatcattgggt
gtaggcagaggtagagctgttgcgatgcgtgccaaagcggctgggcgtggggggaccggt
ggaaggggtgcggttccacccgtgagaaggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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