KEGG   Tetragenococcus halophilus NBRC 12172: TEH_17110
Entry
TEH_17110         CDS       T01640                                 
Symbol
nfo
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
thl  Tetragenococcus halophilus NBRC 12172
Pathway
thl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:thl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TEH_17110 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thl03400]
    TEH_17110 (nfo)
Enzymes [BR:thl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     TEH_17110 (nfo)
DNA repair and recombination proteins [BR:thl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     TEH_17110 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-GeneID: 11260129
NCBI-ProteinID: BAK95038
Position
complement(1742739..1743629)
AA seq 296 aa
MLIGSHVSMKGKKMLLGSAEEAASYDASTFMIYTGAPQNTRRKAIEDMRIDEGKDYMKAH
GLSNIVVHAPYIVNLGNTNKPEMFEFAIEFMQDEIQRAEALGANQITLHPGSHVGAGAKA
GIDQIVKGLNEALDKNQKAQIALETMAGKGTEIGRSFEELASIIDGVTLNDKLSVTLDTC
HASDAGYNIRDDFDGVLEEFDKVIGLDRLQVVHINDSKNEPGSHKDRHENIGFGKIGFDA
LKQVAHHDKLKNLPKILETPWVGEDKKNKKSPYGFEIAMLYNGEFDPDLLEKIKQQ
NT seq 891 nt   +upstreamnt  +downstreamnt
atgttaataggttctcatgtttctatgaaaggcaaaaaaatgttgttaggttcggctgaa
gaagctgcaagttatgatgcctctacttttatgatttatacaggtgcgccccaaaataca
cgtagaaaagcgattgaagacatgcgtatcgatgaaggcaaagattatatgaaagcgcat
ggactgtctaatattgtcgttcatgcgccttacattgttaatttgggcaatacgaataaa
ccagagatgtttgagtttgctattgaatttatgcaagatgaaattcaacgggcagaagca
ttaggggctaaccaaatcactttgcaccccggctctcatgtaggcgcaggtgcaaaggcg
gggattgatcaaattgtcaaaggtttaaatgaagccttggacaaaaatcaaaaagcacaa
atagcattagaaaccatggctggcaaagggacagaaattggtcgttcttttgaagaactt
gcaagtattattgatggtgtgaccttaaatgataagctttctgtcactcttgatacttgt
cacgccagtgatgctggatataatattcgggatgattttgatggcgtattagaagagttt
gacaaagtgattggtttagaccgtttgcaagtggttcatattaatgattcaaaaaatgaa
ccaggttcacataaagatcggcatgaaaacattggctttggaaaaattggctttgatgct
ttaaaacaagtggcacatcatgataaattgaaaaatttacctaagattttggaaactcct
tgggtaggcgaagacaagaagaataaaaaatcgccttatggttttgaaattgccatgctt
tataatggtgaatttgatccagatttactggaaaaaataaagcaacaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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