KEGG   Tetragenococcus halophilus NBRC 12172: TEH_18320
Entry
TEH_18320         CDS       T01640                                 
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
thl  Tetragenococcus halophilus NBRC 12172
Pathway
thl03030  DNA replication
thl03430  Mismatch repair
thl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TEH_18320 (ssb)
   03430 Mismatch repair
    TEH_18320 (ssb)
   03440 Homologous recombination
    TEH_18320 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thl03032]
    TEH_18320 (ssb)
   03400 DNA repair and recombination proteins [BR:thl03400]
    TEH_18320 (ssb)
   03029 Mitochondrial biogenesis [BR:thl03029]
    TEH_18320 (ssb)
DNA replication proteins [BR:thl03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    TEH_18320 (ssb)
DNA repair and recombination proteins [BR:thl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     TEH_18320 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    TEH_18320 (ssb)
Mitochondrial biogenesis [BR:thl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    TEH_18320 (ssb)
SSDB
Motif
Pfam: SSB tRNA_anti-codon tRNA_anti_2 CoV_nucleocap Phage_SSB Secretin_N_2
Other DBs
NCBI-GeneID: 11260208
NCBI-ProteinID: BAK95159
Position
complement(1850968..1851438)
AA seq 156 aa
MINNVVLVGRLTKDPDLRYTQSGTAVANFTLAVNRTFTNQDGEREADFINCVIWRKAAEN
LANMVGKGAQIGVTGRIQTRNYENKEGQRVFVVEVVAENFQMLESRNKQNGQNNANTGAS
NNNANEHSRNQQNSTQSNTDPFGGSSIDVTDDSLPF
NT seq 471 nt   +upstreamnt  +downstreamnt
atgattaacaatgtagttttagtaggaagattaactaaggatcctgacttaagatacaca
caaagtggtacagcagtagcaaactttacgttagctgttaaccgcacatttacaaatcaa
gatggcgaaagagaagcagactttattaattgcgtgatttggcgtaaagcagcagaaaac
ttggcaaatatggttggtaagggtgcacaaattggtgtgactggaagaatccaaacaaga
aactacgagaacaaagaaggacaacgtgtgtttgtcgtagaagttgtagcagaaaacttt
caaatgctagaaagcaggaataagcaaaatggccaaaataatgcaaacacaggtgcttca
aataataacgcgaacgaacattcgcgaaatcaacaaaacagcacacaaagcaatactgat
ccgtttggtggaagttcaattgacgtaacggatgattctctgcctttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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