KEGG   Thermococcus cleftensis: CL1_0355
Entry
CL1_0355          CDS       T02169                                 
Name
(GenBank) putative tRNA pseudouridine synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
thm  Thermococcus cleftensis
Brite
KEGG Orthology (KO) [BR:thm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:thm03016]
    CL1_0355
Enzymes [BR:thm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     CL1_0355
Transfer RNA biogenesis [BR:thm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CL1_0355
 Prokaryotic type
    CL1_0355
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AFL94566
UniProt: I3ZS82
Position
complement(318560..319807)
AA seq 415 aa
MNYREFFSLLRHLSEKPGIGGRIKALPEDFVVIEEPLPSIFEGKRHAIFLLKKRNWDTMT
AVKEIAKRAGISHREIGFAGTKDRHAVTYQYVSVPAEAREKVESLRIRDIELTFVGYGRF
IKLGHLLGNRFRIIVRDVGEGAFERTKEIVRELREKGGFPNYFGYQRFGERRVVNHLVGK
LLLQGEFEEAARLFLGYADGSMEGDEARKTFWETGDVDRALEEFPRFLRYERTLLHTYKK
TGSWKKAFLSLPLPIMRIFIHSYQSYLFNLYLSRRIEELPLNEALVGDVVVQMKGGIPYR
DRTYRVTETNRDFVNEKVRKGQAMVSGPLFGFSMRKAKGLPGELEREILEEEGIGLEAFR
RLPRPMAEPGGRRELLIRPLGLTYGYIPGTGMCFRFFLPKGVYATSVLREIMKDH
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaactaccgcgagttcttctccctgctccgccatctgagcgagaagcctgggataggc
gggcggataaaggccctccccgaggactttgtcgtaatagaagagcctttgccctcgatc
ttcgagggcaagagacatgccatattcctcctcaagaagcgcaactgggacacgatgact
gccgtaaaggagatagcgaagcgtgccggaataagccatcgcgagataggcttcgccggg
accaaggacaggcacgcggtaacgtaccagtacgtaagcgtccccgctgaggccagggaa
aaggtggaatcgctccggatcagggatatcgagctgacctttgtaggctacggccgcttc
atcaagctcggccacctgctcgggaaccggttcaggataatcgtccgagacgttggcgag
ggagcctttgagaggacgaaggagatagtccgcgagctccgcgagaaggggggcttcccg
aactacttcggctaccagcgcttcggagagagaagggtggtgaaccacctagtcgggaag
ctcctcctccagggggagtttgaggaagcggcgaggctcttcctcggctatgcggacggg
agtatggagggcgacgaggccaggaaaaccttctgggaaaccggggacgtggacagggct
ttggaggagttcccgcgctttctgaggtacgagaggactctgctccacacctacaaaaaa
acggggagctggaaaaaggcttttctctcgctcccgctcccgataatgcgcatcttcatt
cactcctaccagagctacctcttcaacctctacctgtcgaggagaatagaggagcttccc
ctgaacgaggccctcgtcggggacgtcgtggtccaaatgaagggcggaatcccctaccgc
gacagaacctaccgcgtcaccgagaccaacagggatttcgtcaatgagaaggtacggaag
gggcaggcgatggtttcaggcccgctcttcggcttctccatgaggaaagcaaagggtctc
ccgggagagcttgagagggaaatcctcgaggaggaagggattggccttgaagccttcagg
agactgccgaggccgatggccgaacccggcgggaggagggagcttttgataaggcccctt
ggcttaacctacggctacattcccggcacgggcatgtgcttccgcttcttcctgccgaag
ggggtttacgcgacgagtgtcctgagggagataatgaaggaccattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system