KEGG   Thermosynechococcus sp. NK55: NK55_07610
Entry
NK55_07610        CDS       T02977                                 
Symbol
pnpA
Name
(GenBank) polynucleotide phosphorylase/polyadenylase PnpA
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
thn  Thermosynechococcus sp. NK55
Pathway
thn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NK55_07610 (pnpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thn03019]
    NK55_07610 (pnpA)
   03016 Transfer RNA biogenesis [BR:thn03016]
    NK55_07610 (pnpA)
Enzymes [BR:thn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     NK55_07610 (pnpA)
Messenger RNA biogenesis [BR:thn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NK55_07610 (pnpA)
Transfer RNA biogenesis [BR:thn03016]
 Prokaryotic type
  tRNA degradation factors
   NK55_07610 (pnpA)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1
Other DBs
NCBI-ProteinID: AHB88811
UniProt: V5V611
Position
complement(1592026..1594173)
AA seq 715 aa
MKGLEKIIPLDGRDVKVVLQKFAPQAAGSILISSGETAVLVTANRAAPREGIDFLPLVVD
YEERLYAAGRIPGGFLRREGRPPEKAILIGRLIDRPLRPLFPQWLRDDLQVVATTVSLDE
NVPPDVLAVTGASIAVLLAQIPFNGPMAAVRVGLVGDEFVINPTYKEIERGGLDLVVAGS
PDGVVMVEAGANELPEADMIEAIDFAYEVIQDLIQAQRDLLKELGIDIVRAEPPAIDPTL
ENFIYERAAQPVKAILKRFEKDKNVRDAALDEVQGAIAQEIAALPEDHPVAVAAAENPKA
LPTLFKAVTKKLMRQQIIEEGVRVDGRRLDEVRPIWCEVGVLPERVHGSALFNRGLTQVM
SVTTLGSPADAQALDDLHPEDSKRYLHHYNFPPYSVGEVKPLRSPGRREIGHGALAERAL
EPVLPPKEEFPYVIRVVSEVLSSDGSTSMGSVCGSTLSLMDAGVPIRKPVSGAAMGLIKE
GNEVRILTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKITGLPVAVIKQAIEQARPARL
HILEKMLAVLDKPRPQLPPSAPRLLTLQIPPDMIGLVIGPGGKTVRGISEQYNVKVDISE
EGLVTITAPNETNAKQARAAIEGLTRKLNAGDVYLGKVTRIIPIGAFVEFLPGKEGMIHI
SQLAEYRVGKVEDEVKIGDEIVVKIREVDSKGRINLTRLGIHPDEAEAARSNSVV
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgaagggtctagaaaagattatccccctagatggacgggatgttaaggtagtattgcaa
aaatttgccccccaagccgccggctccattctcattagttcgggagaaacagctgtactc
gtaacggccaatcgtgctgccccgcgtgaaggtattgattttttgccccttgttgtggat
tacgaagagcgcctctatgcggctggccggattcccggcggttttttacggcgtgagggt
cgcccccccgaaaaagccattctcattggtcgtctgattgaccggccgctgcgccctctc
tttccccagtggttgcgcgacgatctccaagtggtggcaacgacggtttccctcgatgaa
aatgttccccccgatgtgttggcggtaaccggagcctcaattgccgttctcttggcacaa
attccctttaatggtccgatggcagcggtgcgcgtcggccttgtgggggatgagtttgtg
atcaaccccacttacaaagaaattgagcgcggtggcttggatcttgtcgttgccgggtct
cccgatggggtggtgatggtggaggccggtgccaatgaactgccagaagccgacatgatt
gaggccattgactttgcctatgaggtgatccaggacctgattcaagcgcagcgggatctc
ctcaaggaattgggcattgacattgtccgcgctgagccaccggcgatcgaccccacctta
gaaaactttatctacgagcgtgccgctcaaccggtcaaagccattctcaaacgctttgaa
aaggacaaaaatgttcgggatgctgccctcgatgaggtgcaaggggcgatcgcccaagaa
attgctgctctgcccgaagatcacccagtggctgtggcggcggcggaaaaccccaaagcc
ctacccaccctctttaaggccgtcacgaaaaaactcatgcggcagcaaattattgaagaa
ggggtgcgagttgatggccgccgtctcgatgaagtgcgccctatttggtgtgaggtgggg
gttctcccggagcgggttcatggcagcgccctctttaatcgtggcttgacgcaggtgatg
tccgtgaccaccctcggttctcctgccgatgcccaagctcttgatgatctgcatcctgag
gacagcaaacgttatctgcaccactacaactttcccccttactccgtcggtgaagtcaaa
cccctgcgatcgccggggcggcgagaaattggccatggtgcccttgctgagcgtgccctt
gaacccgtccttcctcccaaggaggagtttccctacgtgattcgggtggtgtcggaggtg
ctctcctccgatggctcgacctctatgggctccgtttgtggttccaccctctccttgatg
gatgccggggtaccaatccgcaagcccgtcagtggtgcggccatggggttgatcaaggag
ggcaatgaggtgcgcatcctgaccgacattcaggggattgaagacttccttggggacatg
gacttcaaagtggccggcaccgacagcggcatcaccgccctgcaaatggatatgaaaatt
accggcttgcccgttgccgtgattaagcaggcgatcgaacaggcgcgtccggcgcggctc
catatccttgagaaaatgctggcggtgctcgataaaccccgtccccaactgccccccagt
gcgccacggctgctcaccttgcaaattccccccgatatgattggcctggtcattggtcca
gggggcaaaactgtgcgcggtatctctgagcaatacaacgtcaaggtggacatcagcgaa
gaggggctagtcaccattactgcccccaatgaaaccaatgcgaagcaagcacgggctgcc
attgagggtctaacgcgaaagctcaacgccggtgatgtctatctgggcaaggtgacacga
attattcccatcggtgcttttgtcgagtttctcccgggcaaagaggggatgatccacatt
tcccagttggcggagtatcgcgtcggtaaagttgaggatgaggtgaaaattggcgatgaa
attgtcgtcaaaattcgtgaggtggacagcaaaggccgcattaacctcacccgccttggc
attcatcccgacgaggccgaagccgcccgcagtaactccgttgtctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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