KEGG   Candidatus Thioglobus autotrophicus: SP60_00280
Entry
SP60_00280        CDS       T04079                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
tho  Candidatus Thioglobus autotrophicus
Pathway
tho03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tho00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SP60_00280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tho03019]
    SP60_00280
Enzymes [BR:tho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     SP60_00280
Messenger RNA biogenesis [BR:tho03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     SP60_00280
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ALE53166
UniProt: A0A0M5LJH6
Position
complement(49181..50341)
AA seq 386 aa
MFRKKKQTNIIRQAVDFDQRLLDRDAIKVVQTISKAGFEVYLVGGCVRDLLLGLKPKDFD
IATNAKPEQVHKLFKRSRLIGRRFRLVHVMFSARKFLEVATFRSGQVKTAKSGVIVRDNC
YGKVEEDVVRRDFRVNALYYDINTKEVIDYIGGLQDINDQTIHIIGEPLVRFEEDPVRMI
RAVRFQTKLDFQLSDEIKQAIHQQASLLSNISPARLYEECIKLFHNEYGFQVFERLEKYD
LLKHLFKQTRKNEFIKIALNNTSSRIKRNKPVTPAFLFAVFLWQAQNERFQLIKQKQKST
YLAMSQASEEVIISQIKQVSLPRWLTARIKDTWMMQNRLEKMQPKKVEDILASKGFRMAY
DFLVLRSQSINPELKSVADFWTKAQK
NT seq 1161 nt   +upstreamnt  +downstreamnt
atctttcgtaaaaagaagcaaaccaacatcattcgtcaagcagttgatttcgatcaaaga
ctgctagatagggatgccattaaagttgttcaaactatttccaaagctggctttgaggtc
tatttggttggtggttgcgtacgtgatttattattaggccttaagcctaaagattttgac
attgccactaacgccaagccagaacaagtacacaagttatttaaacgctctcgtttaatt
ggtagacgctttcgcctagtgcatgttatgttctcagcaagaaaatttttggaagttgca
acctttagatcgggccaagtaaaaaccgctaaaagtggtgttattgtgcgtgataattgc
tacggtaaggttgaggaagatgtggttcgtcgtgattttcgagtgaatgcactgtattac
gatatcaatactaaagaagtaattgactatattggtggcttgcaagatataaatgatcaa
accattcatattattggagagccgctggtgcgttttgaggaagatcccgtgcgcatgatt
agagcggttaggtttcaaacaaagcttgatttccagctaagtgatgaaattaaacaggct
attcatcagcaagcgtcattactgagtaatatttccccggctcgactctatgaagagtgc
attaaattattccataatgagtatggcttccaagtgtttgagcgtttagaaaaatatgac
ttattaaagcatttatttaagcaaacgcgtaaaaatgagtttattaaaattgcgctaaat
aatacttccagtagaattaaaagaaacaagccagtaacccctgcttttttgtttgctgta
tttttatggcaggcgcaaaatgaacgctttcagctgattaagcaaaagcaaaaaagcact
tatttggctatgagtcaggcttctgaagaagtgattattagccagattaaacaagtgtcc
ttgccaaggtggctaacagcgcgtatcaaagacacgtggatgatgcaaaatcgattagaa
aaaatgcagcctaaaaaagtggaagatattctcgcaagtaaaggttttcgcatggcgtat
gattttttagtactacgctctcaaagtattaaccctgagcttaaatccgtcgctgatttc
tggaccaaagcacagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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