KEGG T03494: T2812B

Thermotoga sp. 2812B: T2812B_03510

Entry

T2812B_03510      CDS       T03494

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

thq Thermotoga sp. 2812B

Brite

KEGG Orthology (KO) [BR:thq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thq03032]
    T2812B_03510
   03400 DNA repair and recombination proteins [BR:thq03400]
    T2812B_03510
Enzymes [BR:thq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     T2812B_03510
DNA replication proteins [BR:thq03032]
Prokaryotic type
  DNA Topoisomerases
   T2812B_03510
DNA repair and recombination proteins [BR:thq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      T2812B_03510

SSDB

Motif

Pfam:

Topoisom_bac Toprim HTH_17 FAINT

Other DBs

NCBI-ProteinID:

AIY86247

Position

complement(715148..717049)

AA seq 633 aa
MSKKVKKYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVI
KGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTLGRKNRIVFSEITPRVIR
EAVKNPREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDRE
REILRFVPKKYHRITVNFDGLTAEIDVKEKKFFDAETLKEIKSIDELVVEEKKVSVKKFA
PPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYA
KEEARNLITEVFGEEYVGSKRERRKSNAKIQDAHEAIRPTNVFMTPEEAGKYLNSDQKKL
YELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNTGEFP
FEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKK
IRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFS
SVFDRNDRIVVDFPTNQKCSCGKEMRLSFGKYGFYLKCECGKTRSVRNDEIAVIDDGKIF
LRRKDNESGTSDGRSVEGKGNLPEKRRKGKKGS

NT seq 1902 nt +upstreamnt +downstreamnt
atgagtaagaaggtgaagaaatatatcgttgttgaatctcctgccaaggcgaagacgatc
aagagtattcttgggaatgagtacgaagtattcgcttcgatggggcacatcatagacctt
cccaagagcaagttcggtgtggatctggaaaaggatttcgaaccggaattcgcggtgata
aaagggaaagagaaggtagttgaaaagctgaaggatcttgcaaaaaaaggcgaactgctc
atcgcttctgatatggatagagaaggggaagccatagcctggcacatagccagggtaacg
aacacactggggagaaagaacaggatcgtgttctctgagatcactcctcgtgtgataaga
gaagccgttaagaatcctcgagagattgacatgaagaaagttcgtgcgcagcttgcaaga
aggattttagacaggatcgttggttattctctgagtccggttctctggagaaacttcaaa
tccaatttgagcgctggtagagtccaatcagcaaccttgaagctcgtttgtgacagagag
agagaaatcctcaggtttgtgccaaagaagtaccacaggatcaccgtcaatttcgatggt
ctcacagcagaaatagatgtgaaagaaaagaagttcttcgacgctgaaacgttgaaagag
atcaagagtatagacgaactcgttgtagaagagaaaaaggtttctgtgaaaaagtttgcg
cctccagaacccttcaaaaccagtaccctccagcaggaagcgtattctaaactgggtttc
tccgtttccaaaaccatgatgattgcccagcagttgtatgagggcgtggaaacaaaagat
gggcatatcgcgttcataacctatatgagaacagattcaacgcgtgtttcggactacgcg
aaagaagaagccagaaatctgataacggaggtctttggagaagagtacgttggttcaaag
agagaaaggagaaagagcaacgcaaaaatacaggatgcgcatgaggcaattcgtcccacg
aacgttttcatgacacctgaagaagcgggaaaatacctgaattctgaccagaaaaaactc
tacgagttaatatggaagagatttctcgcatcgcaaatgaagccttctcaatacgaggaa
actcgttttgtcctgagaacaaaggatgggaagtacagattcaagggaacggtgctgaag
aagattttcgatgggtacgaaaaggtgtggaagacggaaagaaacacgggagagtttcct
ttcgaagagggagaatctgtgaaaccggtggttgtaaaaatagaggaacaggaaaccaaa
ccgaaaccaaggtacacagagggttctcttgtaaaagaaatggaaagactcggtataggt
cgtcccagcacatatgcgtccacgataaagctcctgttgaacaggggttacataaaaaag
atcaggggctatctctatccaacgattgttggaagcgttgtcatggattatctggagaaa
aagtactctgatgttgttagcgtttccttcacagctgaaatggaaaaggacctcgatgaa
gtcgaacagggtaagaaaacggacaaaatcgttctgcgggagttttatgaatccttttcc
agtgtgttcgacaggaacgacagaattgtggttgattttccgacgaaccagaaatgttcg
tgtggaaaggaaatgaggctctcttttggaaaatacggcttctatttgaaatgcgagtgt
ggtaaaaccagaagcgtgaggaacgacgaaattgcggtcatagacgatggaaagatattc
ctgaggaggaaagacaatgaaagtggcacttctgatgggaggagtgtcgagggaaaggga
aatctccctgagaagcggagaaagggtaaaaaaggctcttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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