KEGG   Thermococcus paralvinellae: TES1_1193
Entry
TES1_1193         CDS       T03005                                 
Name
(GenBank) ERCC2/XPD/Rad3-related DNA repair helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
ths  Thermococcus paralvinellae
Pathway
ths03022  Basal transcription factors
ths03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ths00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TES1_1193
  09124 Replication and repair
   03420 Nucleotide excision repair
    TES1_1193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ths03021]
    TES1_1193
   03400 DNA repair and recombination proteins [BR:ths03400]
    TES1_1193
Enzymes [BR:ths01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     TES1_1193
Transcription machinery [BR:ths03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     TES1_1193
DNA repair and recombination proteins [BR:ths03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     TES1_1193
SSDB
Motif
Pfam: HBB Helicase_C_2 DEAD_2 ResIII DEAD SNF2-rel_dom AAA_35 AAA_19
Other DBs
NCBI-ProteinID: AHF80575
UniProt: W0I7Z3
Position
complement(1138232..1140160)
AA seq 642 aa
MSDYFPYKSLRPNQEEFIRLVDEAVRKGENLVIEAPTGFGKTISVLAGVLPYALSMGFKV
VYLARTHKQMDRVIEELKEINKINPVSGVEFRSRKELCLHSYIQNFAPDAYNAMIVCKNL
KKLHKCDYFENVKKKKDEFNEIVEYFRNSPSQPIEILQYSQLLELCPYEVTRKVGEKANV
IVASYLYMLNPIIREAFIESLGVDYEDLIVIFDEAHNLPNQAIDVLSDKITLNSITRAIK
EAEEYNEHEIANFLGIFLKGLENLYNERLKDREVEEAPVLPESIFAHVFNILNISERLLV
RILREMVEVGDAIREDKIEKNKPPRSYVGRVGEFLLNWLSVIGREDYLFIMSKDKGFSLE
LVALDPSRALDFINDVQSAIFMSGTLTPLEAFKDIMGIENAKLKKFPRMVKKENALVLVA
KDVSTRGEGRNLELYRKMAEYIVEAAKLIPKNVGVFTASYEVLQGLLSANVHLRIEEEVG
KKVFIEKKNASSKGNDILVRAFKEEAKREGGVLLGVMGGRNSEGQDYSGDEMNGVVLVGI
PYARPTPRVQAQIRYFEKKFPRKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGAIIILDYR
VLWSSIRKDLPDWMNETIKPVNLPRMKLYLRRFYRNLEEEKN
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgagcgattacttcccctataaatcactgcgtccaaatcaagaggagttcattaggtta
gttgatgaggcagttagaaaaggagagaatttagtaattgaagctccaactggttttgga
aaaacaataagcgttcttgctggagtgttaccttatgccttgagcatgggttttaaggtt
gtttatctagccagaactcataaacagatggatagggttatagaggaactcaaggagata
aataagataaaccccgttagcggtgtagagtttagaagcagaaaagagctctgcctccac
tcttacattcaaaactttgctcctgatgcttacaatgccatgattgtgtgtaaaaacctc
aaaaagctccacaagtgtgactactttgagaacgttaagaaaaagaaagatgaatttaac
gagattgttgaatacttcagaaattccccttcccagccaattgagattctccagtactcc
cagctcttagagctttgtccttatgaagttacaaggaaagtaggagaaaaggcgaatgtg
attgttgcgagctacctctacatgctcaatccaattattagagaggccttcattgagagt
ttaggagttgattatgaggatttgatagtaatttttgatgaagctcacaacttaccaaat
caagctattgacgttttaagcgataagataacccttaacagcataaccagggcgataaaa
gaggctgaagagtataacgagcatgagattgcaaactttttgggcatcttcttaaaaggg
ctggagaatctctacaatgagcgtttaaaggatagggaagttgaggaagctcccgttctt
ccagaaagcatatttgctcatgtttttaatattcttaatatcagtgagagacttttagtc
aggattttgagagagatggttgaggtaggagatgcaattagagaagataaaattgagaag
aacaagcctccacgttcttatgttggaagagtcggggaatttctgttgaactggctttct
gtaattggtagggaggattatctctttataatgagcaaggataagggtttttcccttgaa
ttggtcgctttagacccttctagggctttggatttcataaacgatgtgcaatcggctatt
ttcatgtccggaacgctgacacctcttgaggcttttaaagacattatgggaattgagaat
gcaaagcttaaaaagttcccgaggatggttaagaaagagaatgctcttgtcttagtcgct
aaggacgtctcgacgagaggagagggaaggaatttagagttatacagaaaaatggctgaa
tacattgttgaagcggcaaagctcattcccaagaatgttggtgtttttacggcttcatat
gaagtccttcaaggtctcttatccgccaacgttcatttgagaattgaggaagaggttggc
aaaaaggttttcattgagaagaagaatgcaagctctaaggggaatgacattttggttaga
gcatttaaagaggaggcaaaaagagagggtggagttttgttaggggttatgggtggtagg
aacagtgaaggacaggattattcgggagatgaaatgaacggtgttgttctggtcggaatc
ccatatgcaaggcctactccgagagttcaagctcaaataaggtattttgaaaagaagttc
ccaagaaagggaagatactacggttattatctgccggctcacagaaagcttgttcaagcg
gctggaagagttcatagaagtgccgaagagaaaggagcaataattattctggactaccgc
gttctttggagctcgatacgaaaagatttacccgattggatgaacgaaactataaaaccc
gttaatctgccgagaatgaagctctatttaagaaggttttacagaaatttggaagaagag
aaaaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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