KEGG   Thalassotalea sp. HSM 43: E2K93_14700
Entry
E2K93_14700       CDS       T05926                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
tht  Thalassotalea sp. HSM 43
Pathway
tht03030  DNA replication
tht03430  Mismatch repair
tht03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E2K93_14700 (dnaE)
   03430 Mismatch repair
    E2K93_14700 (dnaE)
   03440 Homologous recombination
    E2K93_14700 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tht03032]
    E2K93_14700 (dnaE)
   03400 DNA repair and recombination proteins [BR:tht03400]
    E2K93_14700 (dnaE)
Enzymes [BR:tht01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E2K93_14700 (dnaE)
DNA replication proteins [BR:tht03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     E2K93_14700 (dnaE)
DNA repair and recombination proteins [BR:tht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     E2K93_14700 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon
Other DBs
NCBI-ProteinID: QBY05543
UniProt: A0A4V1BSB0
Position
3359173..3362652
AA seq 1159 aa
MQDPKFVHLRVHSDYSMSDGLNKVKPIIAKANDLQMPAIALTDQMNLCGLVKYYGAAQGA
GIKPLIGCDFWLNAPEFANDICRITILASNNTGYKNLTELISKSYLRGELHGKTVLDRDW
LVEYKEGLILLSGAKDGDVGKALLKGNDETVRQCLSFYQQHFADNYFLELIRTARPQEEE
YLHMAVALAAETGVPVVATNEVVFLEPENFDAHEIRVSIHDGFTLDDKRRPRNYSNQQYL
RSEDEMCELFSDIPEALQNSVEIAKRCNVTVRLGEYFLPDFPTGDLDIKDFLVKVSEDGL
QERLEFLVDKDADDFAEKRKEYDERLKIELEVINNMGFPGYFLIVMEFIQWSKDNNIPVG
PGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERISMPDFDVDFCMDRRDEVIDHVA
DLYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPGDPGMTLAKAFEIEP
RLPEVYSQDNEVKDLIDMCRILEGTTRNAGKHAGGVVISPTTITDFAPLYCDSEGLNPVT
QFDKNDVEEAGLVKFDFLGLRTLTILQWAIEMADEKQLKQGKEPIDIAAIPLEDKKSYEL
LLRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKLGRE
EISYPDETWQHESLQPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEE
MAKQRSGFEQGAIDLGIDGQLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKAHFP
APFMAAVMSADMDNTDKIVTLVDECENMGIDLLPPDVNSGLYKFTVNDDDQIVYGIGAIK
GVGEGPIEAIIEARESGGPFRDLFDFCARIDLKKINKRVLERLIRSGAMDNLGPHRAAMA
ATLTEAIKAADQHAKAQAIGQDDLFGLINEEVDDNIQSFQEVPHWEEAVWLDGERETLGL
YLTGHPINRYLDEIKKYGSPRLVNLQPGGKDKISTASGLVIGVRVLINKKGRRWALVTLD
DKSARIDLRLFPDDFERFEEIIKNDSILVCKGQVSFDDFSGGLTMTAREVMTIAQARENF
IKSIDLNVVKQTLEPDFAEKLVTTLSPYKEGTCPLRVFYQRPEASAVLELGTQWRVTPSD
TLIHELKLLLGENNIALQF
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgcaagaccctaaatttgtgcacctacgcgtgcacagcgattactccatgagtgatggc
ctaaataaggtcaaaccgatcatcgccaaggcaaatgatttgcagatgcctgccattgcc
ttgaccgatcaaatgaacctgtgtggtttagttaaatactacggagcggcgcaaggggcg
ggtataaagccattaattggttgtgatttctggttaaatgcccctgaatttgcaaacgat
atttgccgtatcaccatcttagccagcaataacactggctataaaaaccttactgagttg
atttcaaaatcctatctacgcggtgaattacacggtaaaaccgtgctcgatcgcgactgg
ttggtcgagtataaagaagggttaatattattatctggcgcgaaagacggcgatgtcggt
aaagccttactcaaaggtaacgacgaaaccgttcgacagtgtcttagcttttatcaacaa
cacttcgcagataattatttcttagaattgattcgtaccgctcgtccacaagaagaagaa
tacttgcacatggctgtggcattggctgcagaaaccggtgtgcccgttgtcgctaccaat
gaagtggtatttttggaaccggagaattttgatgctcatgaaattcgagtatcaatccat
gatggcttcacacttgatgataagcgccgcccacgcaattattccaatcagcaatatttg
cgcagcgaagacgagatgtgcgagttattcagtgatatcccggaagcgttacaaaactca
gtagaaatagccaaacgttgtaatgtcacagtgcgtcttggcgagtacttcttgccagat
ttcccaaccggtgatctggatatcaaagactttttagtcaaagtgtctgaagacggttta
caagagcgtttagagtttctagttgataaagacgctgacgactttgcagagaagcgtaaa
gagtatgacgagcgcttaaaaatcgagttggaagttatcaataacatgggtttcccaggt
tacttcctaatcgtaatggaatttattcaatggtcgaaagataacaatattccagtagga
cccggacgtggttcaggtgctggttcattggtcgcatacgcactgaaaatcaccgaccta
gatccgctcgaattcgatctactatttgagcgttttcttaaccctgaacgtatttcaatg
ccggatttcgacgtcgacttttgtatggatcgtcgtgatgaagttattgatcacgttgct
gacttgtacggccgtgatgcggtatcgcaaattattacctttggtaccatggccgcaaaa
gcggtcatacgagatgttggtcgcgtattgggccatccttatggttttgtcgaccgcata
tcaaaattaatacctggcgacccgggtatgacgttggcgaaagcctttgaaattgaacct
cgcttgcctgaggtatacagccaagacaatgaggttaaagaccttattgatatgtgtcgt
attttggaaggtaccacacgtaatgccggtaaacatgctggtggtgttgttatttcaccg
accacgattaccgatttcgcaccgttgtattgcgatagcgaagggcttaacccggttact
caattcgataagaatgacgtcgaagaagcgggtctggttaagtttgactttttgggtctt
agaaccttaaccattttgcagtgggccattgaaatggccgatgaaaagcagcttaagcaa
ggcaaagagccaatcgatattgctgccattccgcttgaagataagaaaagctatgaactc
ttattgagagctgaaacaaccgccgtattccagttggaatcacggggtatgaaagatctg
atcaaacgtctaaaacctgactgttttgaagatatgatcgctttggtagcgttattccgt
ccgggtccattgcaatccggcatggtagataactttatcgaccgtaagctcggtcgagaa
gaaatcagttaccctgatgaaacctggcaacatgaatcgttacaaccaatcctagagcca
acctacggtatcattctatatcaagagcaggttatgcaaatcgctcaggttttggcaggt
tataccctaggtggcgcggatatgttacgtcgtgcaatgggtaaaaagaaaccggaagaa
atggccaagcagcgttctggtttcgaacagggtgcgattgacttgggcattgacggtcag
ttggcgatgaaaatctttgacttggttgagaaattcgccggttatggttttaacaaatcg
cactccgcagcttacgctttggtttcctatcaaaccttatggatgaaagctcactttcct
gcgccatttatggccgcggttatgtctgcggatatggacaacaccgacaaaatcgtcact
ttagtcgatgaatgtgaaaacatgggcatagatttattaccgcctgatgtgaacagtggc
ttatataaatttaccgtcaacgatgacgatcaaattgtttacggcatcggcgcaattaaa
ggcgttggtgaaggtccaattgaagcgataattgaagctcgtgaaagtggtgggccgttt
agggacttatttgatttttgtgctcgtattgatctgaagaaaattaataagcgcgtgtta
gagcgtttgattagatcaggcgccatggataaccttggtccacatcgtgctgctatggca
gcaaccttgaccgaagccattaaggcggctgatcaacacgccaaagcacaagctatcggt
caggatgacttatttggtctgatcaacgaagaagtcgatgataatattcagtcattccag
gaagttccacattgggaagaagcggtttggctagacggtgaacgggaaacattaggtcta
tacttgaccggtcacccaataaatcgttatttggatgaaattaaaaaatacggttcgcct
cgattggtaaatctgcaacctggcggcaaagataaaatatctactgcctcaggcctagtc
attggtgtaagggtgttaatcaataaaaaaggccgacgttgggctttggttacccttgac
gataaaagtgcccgtatagatttacgactgtttccagatgattttgagcgctttgaagaa
atcataaaaaatgactcaattttggtctgtaagggacaggtcagctttgatgatttctcc
ggaggccttacaatgaccgcccgagaagtaatgacaattgctcaggcacgtgaaaatttc
attaagtcaattgacttaaacgttgtaaaacaaacacttgaaccagatttcgcagagaaa
ttggtcaccacactgtcaccatacaaagaggggacatgtccactaagagtgttttatcaa
cgacctgaagcatcggcagtacttgaattaggtacacaatggcgagtaacgcctagtgat
accttaatacatgagttaaaactgttattaggcgagaataatatcgctttacagttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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