KEGG   Thermoanaerobacter sp. X513: Thet_1718
Entry
Thet_1718         CDS       T01317                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
thx  Thermoanaerobacter sp. X513
Pathway
thx03030  DNA replication
thx03430  Mismatch repair
thx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Thet_1718
   03430 Mismatch repair
    Thet_1718
   03440 Homologous recombination
    Thet_1718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thx03032]
    Thet_1718
   03400 DNA repair and recombination proteins [BR:thx03400]
    Thet_1718
Enzymes [BR:thx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Thet_1718
DNA replication proteins [BR:thx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Thet_1718
DNA repair and recombination proteins [BR:thx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Thet_1718
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 HROB
Other DBs
NCBI-ProteinID: ADN55299
Position
complement(1682775..1686212)
AA seq 1145 aa
MFVHLHVHSEYSLLDGSCRIKDLIAKTKELNMKAIAITDHGVMYGVIDFYKEAVAQGIKP
IIGCEIYVAPRSMQDREYGIDNENYHLVLLAKDMTGYKNLMKIVTVASIEGFYYKPRVDR
EFLKEHSEGLIALSACLAGEVPSYILRGEYEKAKEAALFYDSIFGRGNFYLELQDHGILE
QQKVNKELIRLSKETGIPLVATNDVHYLEKKDAKAHEVLLCIQTGKTIDDEDRMSFPTDE
FYLKSPEEMENLFSCCKEAIENTEKIADMCNVEFEFNKTKLPKYDLPEGVDSCEYLRNLC
YEGLYKRYKNPSKEVIERLDYELSVIEQMGYVDYFLIVWDFIKFAKDNGIMTGPGRGSAA
GSLVAYTLGITNIDPIKYNLLFERFLNPERVSMPDIDSDFCYERRQEVIDYVVKKYGKDN
VAQIITFGTMAARAVIRDVGRALNYLYAEVDVIAKMIPFELGMTIDKALSLNPELKARYE
NEEKVKQLIDISRSLEGLPRHASTHAAGVVISKEPLVNYVPLQKNEDSIVTQFPMTTLEE
LGLLKMDFLGLRTLTVIRDTIEMVEKNRGVTIDFDSMEYDDPKVYELISKGETEGVFQLE
SSGMKQFMAELKPKNLEDIIAGISLYRPGPMDQIPRYLANRNHPESIVYDHPLLKPILDV
TYGCMVYQEQVMQIVRDVAGYSLGRSDLVRRAMAKKKMDVMEQERKNFIYGIVDEEGNVI
VPGALRNGLDEATANKLFDEMLDFANYAFNKSHAAAYAVIAYQTAYLKRYYPVEFMAALL
NSFVDNLDKVAFYVQVCRKMGIKVLPPDINESDSYFTVVEDKIRFGLSAVKNVGLNMTME
IVSERERNGKFKSVVDFFERMQDSQLNKKAVESLIKAGAFSSFGVRRSQLLSAYDKLMEN
IKKNRNNNLNGQISLFGEVEQTHGVGFEFPDLEEFPKSRLLSMEKETLGLYISGHPLEEY
MEDIPKITNATTLDFKVSEEEMFQPKLQDNQEVVIAGVIATKKIKFTKNNNIMAFVTIED
LYGTVEVIVFPTVYEKYSSIIKEDNPVVVRGKVSLKEEEEPKILCDEIKPLSQAIVKKLY
LNLQDSTKIEIVKQILRKNPGNMPVVLKLNSKKLLAANRDLWVNGSKELIKELHAVLGEE
NVKVV
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgtttgtccatttgcacgttcattctgaatacagtttacttgacggttcttgcagaatt
aaagatttaattgccaaaactaaagagttaaacatgaaagccatagctattacagaccat
ggagtgatgtatggcgtaatagatttttataaagaagcagtagcacaaggaataaaacct
attataggctgtgaaatttatgtagcccctcgaagcatgcaggatagagaatatgggatt
gataatgaaaattatcacttggtgttactggcaaaagacatgacagggtataaaaattta
atgaagatagtgactgtggcttcaattgagggcttttattataaaccgcgagttgacaga
gagtttttaaaagagcacagtgaggggctaatcgctttaagtgcttgccttgcaggagaa
gttccttcttatatcttaagaggtgagtatgaaaaagcgaaagaggcagcacttttttac
gactctatttttggacgagggaatttttatttagaactgcaggaccatggaattttagaa
cagcaaaaggtaaataaagagcttataagactatccaaagagacgggaatacctttagtt
gctactaatgatgtacactatctcgagaaaaaagacgcaaaagctcatgaagtgctattg
tgcattcaaacaggaaagacaattgatgatgaagatcgcatgtcttttccaactgatgaa
ttttatttaaaatctcccgaagagatggagaatcttttttcttgttgtaaagaggcaatt
gaaaatactgagaagattgcagacatgtgcaatgtagaatttgagtttaataagacgaaa
ttgcccaaatacgatttgccagaaggcgttgattcctgtgaatatttgagaaatttatgt
tatgaaggattgtacaagaggtacaaaaatccaagcaaagaagtgattgaaagattagat
tacgaactttctgtaatagagcaaatgggatatgtagattatttcctcatagtgtgggac
tttataaagtttgcaaaagacaacgggattatgacgggaccaggaagaggttctgcggca
ggtagtttggtagcctatacgttgggaataaccaacatagatcctataaaatacaacctt
ctttttgagaggtttttaaaccctgagagggtcagcatgcctgatattgattcagacttt
tgttatgagagaagacaagaagtaattgattacgttgtaaaaaaatatggtaaggacaat
gtggctcaaattataacttttggtacaatggcggcgagagcggttataagggatgtagga
agggctttaaattatctctatgcagaggtagatgtaattgcaaaaatgattccttttgaa
ttgggaatgactattgataaagctttatctttaaaccctgaacttaaagcgcgatacgaa
aatgaagaaaaagtaaaacagcttattgatatttctaggtctttagaaggccttcctaga
catgcctctactcatgctgcgggagtagtaatatcaaaagaaccccttgtcaactacgtg
ccactgcaaaaaaacgaagattccatagtgacccaatttccgatgaccacccttgaagag
ttagggcttttgaagatggactttttgggactgagaactttgacggttataagggatact
attgaaatggtagaaaagaacaggggtgtgactatagattttgattctatggaatatgat
gaccctaaagtttatgaacttatatcaaaaggggaaaccgagggcgttttccaattagag
tcttctggcatgaaacagtttatggcagaattaaagcctaaaaaccttgaggacataata
gcaggaatttctctctatcgacccggacctatggaccaaattccaagatatcttgcaaat
agaaatcacccagagagtatagtctatgaccatcctcttttaaagccaattttagacgta
acttatggctgcatggtgtatcaagagcaagttatgcaaattgtaagagatgtcgctggt
tactctttaggcaggtctgacttggtaagacgagctatggctaaaaagaaaatggatgta
atggaacaagaaagaaagaattttatctatgggatagttgatgaagagggaaatgtgata
gttccaggggctttaagaaatggattagacgaggcaactgctaataaactttttgacgaa
atgttagattttgcaaactatgcttttaataaatctcatgctgcggcttatgctgttata
gcttatcagactgcatatttgaaaaggtattatcctgtagaatttatggcagctctttta
aacagttttgtagataacctggataaagtagctttttatgtgcaagtttgtagaaaaatg
gggataaaggtgctgccccctgatataaacgaaagtgattcctattttacagtggtagaa
gataaaataaggtttggccttagcgcagtaaaaaatgttggtttaaatatgacaatggaa
atcgtaagtgaaagagaaagaaatgggaaatttaaatctgtagtcgacttttttgagagg
atgcaggacagtcaattaaataaaaaagcagtggaaagcttaattaaagcaggagctttt
agttcttttggagtgcggcgttctcaacttctatcagcatatgacaaattaatggaaaat
ataaagaaaaatagaaataataatttaaatgggcaaatttctttatttggagaagtagaa
caaactcatggggtggggtttgaatttcctgatttagaggaattccctaaaagtagattg
ttgtccatggaaaaagaaactttaggcctttatataagtgggcatcctctagaagaatac
atggaagatattcctaaaattactaatgccactactttggattttaaagttagcgaagag
gaaatgtttcagcccaaattgcaagataaccaagaagtggtgatagcaggagttatagct
acaaaaaaaattaaatttacaaaaaataacaatatcatggcttttgtcacaattgaggac
ttatatggtactgtagaagtaatagtatttccaactgtatatgaaaagtattccagtata
ataaaagaagacaacccggttgtagtgaggggaaaggttagtttaaaggaagaggaagag
cctaagattttatgcgatgaaattaagccattgtctcaagcgatagtgaagaaactttat
cttaatttacaggattctacaaagattgagattgttaaacaaatattgcgcaaaaatcct
ggtaatatgccagtagttttaaagcttaacagtaaaaaattattagcggctaatagagat
ttgtgggtaaatggaagcaaagaattaattaaagaacttcatgctgtcttaggagaggaa
aatgtcaaagtagtttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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