KEGG   Thioploca ingrica: THII_3873
Entry
THII_3873         CDS       T03616                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
tig  Thioploca ingrica
Pathway
tig00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:tig00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    THII_3873
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tig01007]
    THII_3873
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tig03016]
    THII_3873
Enzymes [BR:tig01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     THII_3873
Amino acid related enzymes [BR:tig01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   THII_3873
Transfer RNA biogenesis [BR:tig03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    THII_3873
SSDB
Motif
Pfam: tRNA-synt_1f Anticodon_2
Other DBs
NCBI-ProteinID: BAP58170
UniProt: A0A090AR06
Position
complement(4688744..4690333)
AA seq 529 aa
MPKVTWPHQEANRLHSIVLNSDQPIIFETGYGPSGLPHIGTFAEVARTTFVIKALQHDFP
EAKVRLIAFSDDMDGLRSLPENIPHHEKLRPFLGMPLSAIPDPFKQAASFADYMNKQLQR
FLNSYGFDYEFHSSTRCYQQGIFDNGLKQVMDHYNSIRELFIATISKEKRASWSPFFPLC
ESCGKIYTTRVIEVDPLHYSLSYQCDQVGKDFNPCGHVGTTMITGGKVKVGWKIDWALRW
YTFGVHYEMYGKDLISSANLASKICSILGGNPPVLYKYELFLDETGAKISKKIGNGISME
QWIKYSPLGALLNFLLANPNKARPMGLPILPKIVDEYIDVLGKENPQDTHFHRWFIDNVQ
HRQDASYLKNNELSYNLLTNVAQNLGIKDAGLLYQYALKYDPTVAQNQDFFQLLCEKVIA
YVQDYEEQTSKEPLTIDLSYAQYLPELIEIIEKEDNFDNLTGEEIQALAFIIPKKYNLSQ
PEWFKFLYSVLLNKEQGPRFGPFLGILGKKTVLSMLNKAKEHCVVEPIN
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgcctaaagtaacttggcctcatcaagaagctaaccggttacattctatagtattaaat
tcagatcaaccgattatttttgaaaccggttatggaccatccggacttcctcatattggt
acttttgcggaagttgcacggactacttttgtaattaaggcgttacagcatgactttccg
gaggctaaagtccgtttaattgcattctctgatgatatggatggtttaagaagtttaccc
gagaatattccccatcacgaaaaattacgaccgtttttgggaatgccgctgtctgctatt
cctgatccatttaaacaagcggcgagttttgccgactacatgaataagcagttgcaacga
tttttaaattcctatggctttgattatgaatttcattcttctacccgctgttatcaacaa
ggaatttttgataatggcttgaaacaggtcatggaccattataattccattcgggaatta
ttcattgcaacgatttcaaaagaaaaaagagccagttggagtccattttttccactttgt
gaaagctgtggtaagatttatactacccgagtgattgaagtcgatccgctccattattcg
ctgagctaccaatgcgatcaagttggaaaagattttaacccctgtggtcatgttggcaca
acgatgattacgggcggaaaagtgaaggtgggttggaaaattgactgggctttacgttgg
tatacttttggggttcattatgagatgtatggcaaagatttgattagttcggctaaccta
gccagtaaaatctgctcaattttaggtggtaacccgccagtgctgtataaatatgaactg
ttcttagatgaaaccggcgctaaaatttctaaaaaaatcggtaatggcatttctatggaa
caatggattaaatattcaccattaggtgctttattaaatttcttactcgctaatccgaat
aaagctagacccatgggtttaccgattttacctaaaattgttgatgaatatattgatgtc
ctgggtaaagaaaatccacaagacactcattttcatcggtggtttattgataatgttcaa
catcgacaggatgcttcttatttaaaaaataatgagttgagttataatttgttaactaat
gttgcccaaaatttagggataaaagatgctgggttactctatcaatatgcgctaaagtat
gatccgacggtggcacaaaaccaagacttttttcaattattgtgtgaaaaagtgattgct
tatgtccaagattatgaagaacaaacgtctaaagaacccttaactatcgatctatcctat
gcccaatatttaccagagttaatagaaattattgaaaaagaagataattttgataatcta
accggtgaagaaattcaagccttggctttcattattcctaaaaaatataatttaagtcag
ccagaatggtttaaatttctctattcggtgttattgaataaagaacaaggtccccgcttc
gggccttttttaggaatattaggtaaaaaaacggttttgtctatgctcaataaagccaaa
gaacattgtgtggttgaacccattaactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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