KEGG T05581: DY252

Thalassospira indica: DY252_01055

Entry

DY252_01055       CDS       T05581

Symbol

truB

Name

(GenBank) tRNA pseudouridine(55) synthase TruB

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

tii Thalassospira indica

Brite

KEGG Orthology (KO) [BR:tii00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tii03016]
    DY252_01055 (truB)
Enzymes [BR:tii01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DY252_01055 (truB)
Transfer RNA biogenesis [BR:tii03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DY252_01055 (truB)
Prokaryotic type
    DY252_01055 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2 TruB-C_2

Other DBs

NCBI-ProteinID:

AXO12997

Position

complement(226873..227799)

AA seq 308 aa
MARRRRGKSINGWLAVDKPLEITSSTVVNQVRRLLDANKAGHGGTLDPLASGVLPIAFGE
ATKTVAYVMDGSKSYRVTLKFGEARSTDDAEGEVIETSDHRPTEDEIKAVLGEFIGEIQQ
VPPKFSAIKVNGKRAYDLARRDEDVVLKPRPILIKDLRLVDMPDRDHAVFDVVSGKGAYM
RSLARDISLRLGTVGYIAALRRTSAGPFSEGSSIPLQELLDMDPDEVMKKLLPVETALDD
IPALALTEVEAQRLSSGQPVGLLPVAKRNALENPVVQDEIVCAMLHDRAVALAEITGGEI
RPVRVFNL

NT seq 927 nt +upstreamnt +downstreamnt
atggcgcgtcgccgtcgcggtaaaagcattaatggctggctggcggtggacaagcccctg
gagatcacgtcatcaaccgtggtcaatcaggtgcgccgtctgcttgatgccaacaaggcc
ggacatggcgggacgcttgacccgctggcgtctggcgtactgccaattgcctttggcgaa
gcaaccaaaacggttgcctatgtcatggatggcagcaaaagttatcgcgtaacgctgaaa
ttcggcgaagcgcgcagtacggacgatgccgaaggcgaggttattgaaacctccgaccat
cgcccgactgaagacgaaatcaaggctgtgctgggtgaattcataggtgaaatccagcag
gtgccgccaaagttttcggcgatcaaggtcaatggcaagcgtgcctatgatcttgcgcgc
cgcgatgaagatgtggtgcttaagccgcgtccgattctgatcaaggatcttcgactggtc
gacatgccagatcgcgatcacgccgtgtttgacgttgtgtcaggcaagggcgcgtatatg
cgatctttggcgcgcgatatctcgctgcgcctgggcaccgtcggctatatcgccgcgctt
cgccggacttcggcggggccgttttcggaagggagctccattcccctgcaggaactgctg
gatatggacccggacgaggtgatgaagaaactgcttccggttgagaccgcgctggacgac
atcccggcgctggccctgaccgaagtcgaggcgcaacgcctttcctctggccagcccgtc
gggctgttgccggtggcaaagcgcaatgcccttgaaaaccccgtcgtgcaggacgaaatc
gtctgtgccatgctccatgaccgcgctgttgcgttggctgagatcactggtggcgaaatt
cggcctgtgcgtgtttttaatctctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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