KEGG T05581: DY252

Thalassospira indica: DY252_02520

Entry

DY252_02520       CDS       T05581

Name

(GenBank) phenylalanine--tRNA ligase subunit beta

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

tii Thalassospira indica

Pathway

tii00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:tii00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DY252_02520
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tii01007]
    DY252_02520
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tii03016]
    DY252_02520
Enzymes [BR:tii01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     DY252_02520
Amino acid related enzymes [BR:tii01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   DY252_02520
Transfer RNA biogenesis [BR:tii03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    DY252_02520
Prokaryotic type
    DY252_02520

SSDB

Motif

Pfam:

B3_4 tRNA_synthFbeta FDX-ACB tRNA_bind B5

Other DBs

NCBI-ProteinID:

AXO13251

Position

519074..521482

AA seq 802 aa
MKFTLNWLKQHLDTDASIEVVAEKLTDIGLEIEGVTDRAAALADIRVAHIEEAGQHPDAD
RLKLCRVNTGEKIIQVVCGAPNARTGLKVALAQPGAIIPIDGSKLKPGKIRGIESQGMMC
STRELCLGEDHDGIIELPEDAEIGAPVASVLGADDPILEIGLTPNRPDCTGVRGIARDLA
AAGIGTLKADPRQEPVAGAFDSPIGVTISTEIASNNAVPAFYGRYIRGVKNTESPEWLKA
RLEAIGLRPISALVDITNLVTHDLGRPLHVFDADKLSGDINVRYATNGEKIAALDNREYE
LSDSMVVIADQAKALGIGGIIGGEETGCLEETTNVFVECALFDPISIAKTGRKLQINSDA
RYRFERGVDPQSVAWGMEVATHLITEICGGEVSHVVKAGEVPNPRNAFDLRIDRIRELGG
VAVEADRAIEILKSLGFEVSGSAPVINAVAPTWRPDIIGEADLVEEVLRIVGYDKIPTVP
LERETSLPVPALSPFQKRVGLTRRVLASRGLYETVTWSFTDSRWAKLFGELKDGLYLANP
ISSDLDIMRPNALINMIAAAGRNQARGFSDLALFEVGPEFFGDQPGDQRLVAAGLRSGAT
TPRSWTGSRRDVDVFDVKADAEALIEALGTSAANVQVNTDGAPEWYHPGRSAALQLGPKN
VLGYFGELHPKVLKALGVKGRVVAFELFVENVPMPKKKGTARPALNASSFQSVERDFAFL
LDEAVKAEAIIKAAKGADRNLITDVTIFDLYAGKGIEDGKKSLAFSITLQPTKATLTEEE
IEAVCKKVVEAVEKATGGSLRA

NT seq 2409 nt +upstreamnt +downstreamnt
atgaaattcacactgaattggctgaaacagcaccttgataccgatgcgtcgattgaggtg
gttgccgaaaaactgaccgatatcggtcttgaaatcgaaggcgtgaccgaccgcgcggca
gcccttgccgacatccgtgtcgcccacattgaagaagccggacaacatcccgatgctgac
cgcctgaagctttgccgggttaataccggcgaaaaaatcattcaggtcgtttgtggtgcg
ccgaatgcccgtaccggacttaaggtcgcattggcacagccgggcgcgatcattccgatt
gatggctcaaaactgaagccgggcaaaatccgtggtatcgaaagccagggtatgatgtgc
tcaacccgcgagctctgccttggtgaagaccatgacggcatcatcgaactgcctgaagat
gccgaaatcggtgcaccggttgcgtctgtccttggtgcggatgatccgatccttgaaatc
ggcctgaccccgaaccgcccggactgtaccggtgttcgcgggatcgcccgcgatctggcg
gctgctggcatcggcacacttaaggctgatccgcgccaagagccggttgctggtgcgttt
gacagcccgattggcgttacgatcagtaccgagattgcatccaacaatgccgttccggcc
ttctatggccgctacatccgcggtgtgaaaaacaccgaaagcccggaatggctgaaagcc
cgtctggaagccatcgggctgcgtccgatttccgccctggtggatatcaccaaccttgtg
actcatgaccttggtcgtccgctgcatgtgtttgatgccgacaaactgtcgggcgacatc
aatgtgcgttacgcgaccaatggcgaaaagatcgcagcccttgataacagggaatacgaa
ctttccgactccatggtggtgattgccgatcaggcaaaggcactgggcattggtggcatc
atcggtggtgaagaaactggctgccttgaagaaacgaccaatgtgtttgtcgaatgcgca
ctgtttgatccgatcagcattgccaagaccggtcgtaagcttcagatcaattccgatgca
cgctatcggtttgagcgtggcgttgatccgcagtcggttgcctggggcatggaagttgcc
acccatctgatcaccgagatctgcgggggtgaagtatcccatgtcgtcaaggcgggcgaa
gtaccaaatccgcgcaacgcctttgatctgcgcattgatcgtattcgtgagctgggcggc
gttgccgttgaagcagatcgggcgattgaaatcctgaaatcgctgggcttcgaggttagc
ggttctgcaccggttattaacgccgtcgcaccgacctggcgtccggacatcatcggtgaa
gccgatctggtcgaggaagtcctgcgcattgtcggttatgacaaaatcccgacagtcccg
ctggaacgtgaaaccagcctgccagttccggccttgtcgccgttccagaaacgcgttggc
ctgacccgtcgggttctggcatcgcgcggtctttatgaaaccgtgacctggtcctttacc
gactcgcgttgggccaagctgtttggtgaactcaaagacggtctgtatctggcgaacccg
atcagttctgaccttgatatcatgcgcccgaacgccttgatcaacatgattgcggcggcc
ggtcgtaaccaggcccgtggtttttccgatctggcgctgtttgaagttggtccggaattc
tttggcgatcagccgggcgatcagcgtctggtggccgcaggcttgcgttccggtgcaaca
actccgcgcagctggaccggttcacgccgtgatgtcgacgtgtttgacgtcaaggccgat
gccgaagccctgatcgaagcactgggtaccagtgccgccaatgttcaggtcaataccgat
ggtgcgccggaatggtatcatccgggccgctcggcagccctgcagctgggtccgaaaaat
gttctgggctatttcggcgaattgcatccgaaagtgcttaaggcacttggcgtcaaaggc
cgcgttgttgcgtttgagttgtttgttgaaaacgtcccgatgccaaagaaaaagggcaca
gcccgtccggcgctgaacgcatcaagcttccagtcggtcgaacgcgactttgccttcttg
cttgatgaagctgtgaaggcagaggcgatcattaaggccgccaaaggtgccgatcgcaat
ctgatcacggatgtaacgatcttcgacctttatgccggcaaggggattgaggatggcaaa
aagtcactcgccttctcgatcacgctgcaaccgaccaaggcaaccctgaccgaagaagaa
atcgaagcggtctgcaaaaaggttgtcgaagcggttgagaaagccacgggtggctctctg
cgcgcctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

Download RDF

DBGET integrated database retrieval system