KEGG   Thalassospira indica: DY252_21740
Entry
DY252_21740       CDS       T05581                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
tii  Thalassospira indica
Pathway
tii03030  DNA replication
tii03430  Mismatch repair
tii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DY252_21740
   03430 Mismatch repair
    DY252_21740
   03440 Homologous recombination
    DY252_21740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tii03032]
    DY252_21740
   03400 DNA repair and recombination proteins [BR:tii03400]
    DY252_21740
Enzymes [BR:tii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DY252_21740
DNA replication proteins [BR:tii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DY252_21740
DNA repair and recombination proteins [BR:tii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DY252_21740
SSDB
Motif
Pfam: DNA_pol3_gamma3 DNA_pol3_delta2 DUF3646 AAA AAA_22 AAA_5 AAA_30 RuvB_N AAA_16 AAA_14 AAA_19 AAA_2 AAA_assoc_2 AAA_24 Rad17 nSTAND3 AAA_18 Glyco_tranf_2_5
Other DBs
NCBI-ProteinID: AXO16551
Position
4607407..4609296
AA seq 629 aa
MSEQIETASETAPEGDTVTDSNVADTTAPVTTAEPESKSEYQVLARKYRPKSFDELIGHG
PMVKTLSNALESGRLAHAFILTGVRGIGKTTTARIIARALNCIGADGKGGATIEPCGVCE
HCRAIAEDRHVDVLEMDAASRTGVDDIRELIEGVRYRPTSARYKIYIIDEVHMLSKSAFN
ALLKTLEEPPEHVKFIFATTEIRKIPITVLSRCQRFDLRRVQTDELAAHYSRIAGLENAE
IEEEAVTLIARAADGSVRDGMSLLDQAISHGAGKVTTQQVRDMLGLSDRSRIFDLFDHTM
KGEINEALELLGAQYALGGDPPVMLQDMLDLTHWLTRVKLSPDAANDPGVSQIERERGKE
IAAKLAMPQLTRAWQMLLKGLEETRIAPSPIQAAEMILIRLAYAAEMPPPGDLIKKLRQD
MNNAGNGGGAPQGGGNGGGSGGPGPRMQVVNGGGGAAAVARARPDPLGEPQQVEQPVYAK
MPETFEEVAELLGKDRETTGLSMQVKNYMHLVKYEPGRIEFRPARGAGSDLSTKLIKALN
GLTGHRWLVSVSEREEGAPTLKEQELEALEQRKADASQDPLVRAILDGLPKAKIVAVHLP
PGQENAEGEEDESGSVYDDAFYLEGDDEL
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgagcgagcagatcgagaccgccagcgaaacggcaccagaaggtgacacggtgacagac
agtaacgtcgcggacacaaccgcgcccgtcaccacggccgagccagaaagcaaaagcgag
tatcaggttcttgcgcggaaataccgcccgaaatcctttgatgaactgatcggccacggg
ccgatggtcaagacgctgtcaaatgcgcttgaaagtggccgtcttgcccatgcctttatc
ctgaccggtgtgcgcgggattggtaaaaccacgacggcgcgtatcattgcgcgtgccctg
aactgcattggtgcggatggcaagggcggtgcgacgatcgagccgtgcggtgtgtgtgag
cattgccgcgcgattgccgaagaccgtcatgttgacgttctggaaatggatgcggcgtcg
cgtaccggtgttgatgacattcgcgaactgatcgagggtgtacgctatcgcccgacgtcg
gcgcgctacaagatctacatcatcgacgaagtgcacatgctttcgaaaagtgcgtttaac
gcgcttttgaagacgcttgaagaaccgccagagcatgtgaaattcatctttgccaccacc
gaaatccgcaaaatcccgatcacggtcctgtcgcgttgtcagcgctttgacttgcgccga
gtgcagaccgacgaactggccgcgcactatagccgcatcgccgggcttgaaaatgccgag
atcgaagaagaagccgtcaccctgatcgcgcgtgccgccgatggttcggtgcgtgatggc
atgagcttgctcgatcaggcgatttcgcatggtgctggcaaggtcaccacccagcaggtg
cgtgatatgctgggcctttcggatcggtcgcggattttcgatctgttcgatcacaccatg
aagggcgagattaacgaggcgctggaacttcttggtgcgcaatatgcccttggcggtgat
ccgccggtgatgttgcaggatatgcttgatctgacccactggctgacacgtgtgaagctg
tcgcctgatgccgccaatgatcccggcgtgtcacagatcgaacgcgaacgcggcaaggaa
atcgccgccaagcttgccatgccgcaattgacccgcgcctggcagatgctgctgaagggc
cttgaagaaacgcggattgcgccatcgcccattcaggccgctgaaatgatcctgatccgt
ctggcctatgccgcggaaatgccaccacccggtgatctgatcaagaagctgcgtcaggat
atgaacaatgccggtaacggcggcggcgcgccccaaggtggcggcaatggcggcggcagt
ggcggtccgggaccgcgcatgcaggttgttaatggcggcggcggtgcagccgcagtggcg
cgggcgcgaccagacccgctgggcgaaccccaacaggtcgaacagccagtctatgccaag
atgccggaaacgttcgaagaagttgccgagttgcttggcaaggaccgggaaaccaccggc
ctttcgatgcaggtcaaaaactatatgcatctggtgaagtatgagccgggtcgcatcgaa
tttcgcccggcacgcggggcgggatcggacctttcgaccaagctgatcaaggcgctgaat
ggcctgaccggtcatcgctggctggtcagtgtgtcggagcgcgaagaaggggccccgacg
cttaaggaacaggaacttgaggcccttgaacagcgcaaggcggatgcctcgcaagatccg
ctggtcagggccatacttgatggtttacccaaagccaaaatcgttgccgtccatctgcca
cccggacaggaaaacgccgaaggtgaagaggacgaaagcggttccgtatatgacgacgca
ttttatctcgaaggagacgacgagctatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (30)   

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