KEGG   Thiomonas intermedia: Tint_0003
Entry
Tint_0003         CDS       T01227                                 
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
tin  Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:tin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tin03032]
    Tint_0003
   03400 DNA repair and recombination proteins [BR:tin03400]
    Tint_0003
Enzymes [BR:tin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Tint_0003
DNA replication proteins [BR:tin03032]
 Prokaryotic type
  DNA Topoisomerases
   Tint_0003
DNA repair and recombination proteins [BR:tin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Tint_0003
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 PDDEXK_13 Toprim_4
Other DBs
NCBI-ProteinID: ADG29419
UniProt: D5X2E5
Position
3369..5852
AA seq 827 aa
MNEPKNDSYSENSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALAGFC
DDIVVTIHSDNSISVTDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNSYKVS
GGLHGVGVSCVNALSQWLRLVVRRDGEVHTLEFVRGALQNRQTQMIDGVEVSVAPITGKT
DKRGTEVHFLPDAEIFTTVDFHYEVLAKRLRELSFLNHGVKIRLVDERQGKEENFAFSGG
VKGFVEYINRGKSVLHPNIFYAQAEKASEVGSTISVEVSMQWNDGYAETVQCFTNNIPQR
DGGTHLTGLRAAMTRVMNKYIDDNELAKKAKVEISGDDMREGLTCVLSVKVPDPKFSSQT
KDKLVSSEVRGPVEDLVAKALSDYLLETPTDAKIICGKIIDAARAREAARKAREMTRRKG
VMDGLGLPGKLADCQEKDPALCELYLVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKA
RFEKLLTSNEILTLITAMGTSIGKDDFNIDKLRYHRIIIMTDADVDGAHIRTLLLTFFFR
QMPEIVERGHIYIAQPPLYKVKHGKDEQYLKDASELDAYLLRVALKDAVIHRPDTPAPLA
GETLEQLARQHVLAEAVIARLGVFMDEQALRAIVDGVVIDLDHAAQASADAMAAYLAKHT
DHGEAPQVLAEIDPRTEKPYLRIVRRHHGNLKSTVLHADFVHGADYAVLAQAAQTFHGLI
AAGSTVRRGNGDNAKEAAVASFREAMDWLIRQAENTVGRQRYKGLGEMNPEQLWETTMDP
AVRRLLRVQIDDAIEADRVFTMLMGDEVEPRRDFIETNALRAANLDI
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgaacgaaccgaagaacgacagctacagcgaaaattccattcaaatcctggagggactc
gaagcggtgcgcaaacgtcccggcatgtacatcggcgacacctcagacggcaccggcctg
catcatctggtgttcgaagtcgtcgataactccatcgacgaagccctggccgggttttgt
gatgacatcgtcgtcaccatccactccgacaactccatcagcgtgaccgacaacggccgc
ggcattcctaccggcgtgaagatggacgataagcacgagcccaagcgcagcgcggccgaa
atcgccctcaccgagctgcacgccggtggcaagttcaaccagaacagctacaaggtttcc
ggcggtctgcacggcgtgggcgtgagctgcgtcaacgccctgtcgcaatggctgcggctt
gtggtgcggcgcgacggtgaggtacataccctcgaattcgtccgcggcgcgctgcaaaac
cggcagacgcagatgatcgatggtgtggaagtctccgtcgctccgattaccggcaagacc
gataaacgcggcaccgaggtgcacttcctgcccgatgccgagattttcaccacggtcgat
ttccactacgaagtgctggccaagcgcctgcgcgagctttccttcctcaaccacggcgtc
aagatccgcctggtggatgagcgtcagggcaaggaagaaaacttcgccttctccggcggg
gtgaaaggctttgtcgaatacatcaaccgcggcaagagcgtgctgcaccccaacattttt
tatgcccaagccgagaaagcttccgaggtaggcagcaccatcagcgtggaagtctccatg
cagtggaacgacggctacgctgaaaccgtgcagtgcttcaccaacaacattccgcagcgc
gacggcggcacccacctcaccggcctgcgcgcagcgatgacgcgggtgatgaacaaatac
atcgacgacaacgagttggcgaaaaaagccaaggtcgagatcagcggcgacgacatgcgt
gaaggtctcacctgcgtgctgtcggtcaaggtgcccgaccccaaattcagcagccagacc
aaggacaagctggtgtcgagcgaagtgcgcggcccggtcgaagacctggtggccaaggcg
ctgtccgactacctgctcgaaaccccgaccgacgccaagatcatctgcggcaagatcatc
gacgccgcccgcgcccgcgaagccgcgcgcaaagcgcgcgaaatgacccgccgcaagggc
gtgatggacggtctgggcctgcccggaaaactggccgactgccaggagaaagaccccgcg
ctgtgcgagctgtatctggtggagggcgattccgccggcggctcggccaagcaaggtcgc
gaccgcaagttccaagccatcctgcccctgcgcggcaagattctcaacgtcgagaaagcg
cggttcgagaagctgctcaccagcaatgaaatcctcaccctcatcaccgcgatgggcacc
agcatcggcaaggacgatttcaacatcgacaagctgcgctaccaccgcatcatcatcatg
accgatgccgacgtggacggcgcgcacatccgcaccctgctgctcactttcttcttccgc
cagatgcccgagattgtcgagcgcgggcacatctacatcgcccagccgccgctctacaaa
gtcaaacacggcaaggatgagcaatatctcaaagacgcctctgagctcgatgcctacctg
ctgcgcgtggcgctgaaagacgccgtcatccaccgccccgataccccggcgccgctggcg
ggtgaaaccctcgaacaactcgctcgccagcatgtcctggccgaagccgtgatcgctcgg
ctgggcgtgttcatggatgaacaggccctgcgcgccatcgtcgatggtgtcgtcattgac
ctcgaccatgcggcgcaagccagcgccgatgcgatggcggcctatctggcgaagcacacc
gaccatggcgaagcgccgcaagtgctcgccgagatcgacccgcgtaccgaaaaaccgtat
ctgcgcatcgtgcgtcgtcaccacggcaacctcaaatccaccgtgcttcacgccgacttc
gttcacggggccgactacgccgtgctggcacaagccgcgcagaccttccacggccttatc
gccgcgggctccaccgtgcggcgcggcaacggcgacaacgccaaggaagccgccgtggcc
agcttccgcgaagccatggactggctcatccgccaggccgaaaacaccgtcggccgccag
cgctacaaaggcctgggcgaaatgaaccccgagcaactctgggaaaccaccatggacccg
gccgtgcgtcgcctgctgcgcgtgcagatcgacgacgccatcgaagccgaccgagtgttc
accatgctcatgggcgacgaagtcgaaccccggcgcgacttcatcgaaaccaacgccctg
cgggcggcgaatctggatatttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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