KEGG   Thiomonas intermedia: Tint_0406
Entry
Tint_0406         CDS       T01227                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
tin  Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:tin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tin03009]
    Tint_0406
Enzymes [BR:tin01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Tint_0406
Ribosome biogenesis [BR:tin03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Tint_0406
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Met_10 Methyltransf_25 Methyltransf_15 Methyltrans_SAM UPF0020 Methyltransf_23 RrnaAD MTS
Other DBs
NCBI-ProteinID: ADG29816
UniProt: D5X4Z2
Position
433755..435179
AA seq 474 aa
MEQRLEWLQIDSLDLEARGVGRSENGKVVFVANALPGERVQARIHRSKRNWESGEAVAWA
STASSRVTPRCPHFGVCGGCSMQHVDPAAQLAFKQRILEDDFWHLSRLKPQLLLRPIAGP
NWGYRTRARLTVRLVVKKGGVLVGFHEKGSSYVADMRSCEVLPRAVSDLLLPLRELIAGL
SRPERAPQIELAMGDRVTVLVLRHLEPLTDADRQRLRDFGQQHGVQWWLQPKGPDSVAPL
DPDAEPLSYALPEFGIVMPFRPTDFTQVNPQINRVMVARALRLLGARRTDRVIDWFCGLG
NFTLPIATQARQVLGVEGSATLVARALDNALHNDLQDKVVFTARNLFEMDADDLRAYGEA
DLWLVDPPRDGALALCKALAEAVNGPLGAPGEEETRAAGEASAAPKPVAPPVVPAVAPFK
PPRRIVYVSCNPATLARDAGLLVHQAGYTLRAAGVMNMFPHTAHVESMAVFERD
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggaacaacgattggaatggctgcagatcgacagcctggatcttgaagcccgcggggtc
gggcgaagcgaaaacggcaaagtggtgttcgtcgccaatgccttgcccggagaacgggtg
caggcgcgcattcaccgcagcaagcgcaactgggagtctggcgaggccgtggcctgggcc
agcacggcgagcagccgggtgacgccgagatgcccccattttggcgtttgcggcggttgc
agcatgcagcatgtcgatccggccgcgcagttggcgttcaagcagcgcattctcgaagat
gacttctggcatttgagccgcctgaagccgcaactccttctgcggcccatcgccgggccc
aactggggctatcgcacccgcgcgcggctgaccgttcgcctggtggtgaaaaagggcggg
gtgttggtcggttttcacgaaaaaggctcgagctacgttgcggatatgcgcagttgcgaa
gttttgccgagggcagtgtccgatctgttgctgcccttgcgcgagctgatcgccggcctg
tcccggcctgagcgcgcgccgcagatcgaactggcgatgggcgatcgggtgaccgttctg
gtgttgcgccacctcgaacccttgaccgacgcggatcggcaacgcctgcgcgactttgga
caacagcatggcgtgcagtggtggcttcagcccaaagggcctgattcggtggcgccgcta
gaccccgacgccgaacccctgagctatgccttgcccgagttcggcatcgtcatgccgttt
cgcccgaccgatttcacccaggtgaatccgcagatcaaccgggtgatggtggcgcgggcc
ttgcgtctgctgggcgcccggcgtactgaccgggtgatcgactggttttgcggtctgggc
aatttcaccctgcccatcgccacgcaggcgcggcaggtgctgggcgtggagggcagcgcc
acgctagtcgcgcgggcgctcgacaacgccttgcacaacgatctgcaagacaaagtcgtg
ttcaccgcccgcaatctgttcgagatggatgcggacgatctcagagcctacggcgaggct
gacctgtggttggtggacccgccgcgcgatggcgcgctggcactgtgcaaggcgctggcc
gaggcggtgaacgggccgctgggagcgccgggcgaggaggagacgcgggccgcaggggag
gcaagcgcggcgcccaagccggtcgcacccccggtcgtccccgcggtcgcgccattcaaa
ccgccgcgccgcattgtttatgtgtcctgcaatccggcaaccttggcgcgtgatgccggc
ctgctggtgcatcaggcgggttacaccttacgtgccgcaggggtgatgaatatgtttcct
cacacggcccatgtggaatcgatggcggtgttcgagcgcgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (25)   

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