KEGG   Thiomonas intermedia: Tint_0909
Entry
Tint_0909         CDS       T01227                                 
Name
(GenBank) DNA photolyase FAD-binding protein
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
tin  Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:tin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tin03400]
    Tint_0909
Enzymes [BR:tin01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     Tint_0909
DNA repair and recombination proteins [BR:tin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Tint_0909
 Prokaryotic type
    Tint_0909
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: ADG30303
UniProt: D5WYW5
Position
974891..976372
AA seq 493 aa
MSTLALVWFKRDLRVQDHAALHAAAQCDAALALFVMEPEWIASPECDAQHVQFAADCVAA
LRESLTQAGLRLLVRVGDVPQVFEGVRREMRFTHLFSHEETGPGWTYARDKRVAHWCREQ
GVIWQEWPQNGVVRRLRDRAGWAARWQKRMDAPQVPVPQGLRDASKPLAAGDFPTLRDLR
LPAARPTPAAGTAAALSTLHSFLDTRGAQYRRDLSSPLTAERGCSRLSAHLAFGTLSMRQ
VHQATEQRIRALQASGEPSARNMAYHLRGFAGRLRWHCHFMQKLEDEPGIEFHNFARASD
GLREPEFNPAYFEAWCSGNTGFPMVDACMRCLNATGWINFRMRAMLVSFAAYHLWLHWRE
PGLHLARQFLDFEPGIHWSQMQMQSGTTGINTLRVYSPAKQQADHDPQGEFIRQWVPEWG
TSAYPPPIVNERSAVKQAKDRIYAIRQSPQASDEARAVQQRHGSRESGLPPSGSRSRKPV
APPAPPRQQELFE
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtcgactctggcgctcgtttggttcaaacgcgacctgcgtgtgcaggatcacgccgcg
ttgcacgccgccgcgcaatgcgatgcggcgctggcgcttttcgtgatggagccggaatgg
atcgccagcccggagtgcgatgcgcagcatgtgcagttcgcggcggattgcgtggccgcg
ctgagggagtcgctgacgcaagccggtctcaggctgttggtgcgcgtgggcgatgtgccc
caggtgttcgagggcgttcgccgcgagatgcgtttcacccatctgttcagccatgaagaa
accggcccaggctggacctatgcgcgcgacaagcgggtggcgcattggtgccgcgagcaa
ggcgtgatctggcaggaatggccgcaaaacggcgtggtgcgccgcttgcgtgatcgtgcg
ggctgggcggctcgctggcaaaagcgcatggatgcgccgcaagtgcctgtgccgcagggc
ctgcgcgacgcatccaagccgttggcagcgggcgactttccgaccctgcgcgatctgcgc
ttgcccgcggcccgccccacgcccgctgcgggcacggcggcggccctgtccactctgcac
agctttctggatacgcggggcgcgcagtaccggcgcgatctgtccagcccgctgacggca
gaacgcggctgctcgcgcctgagcgcgcatctggccttcggcacgctctccatgcggcag
gtgcatcaggccaccgagcaacgcatccgcgccttgcaggccagcggcgagccgtcggcg
cgcaacatggcgtatcacctgcgcggttttgccgggcggctgcgctggcattgccacttc
atgcaaaagctcgaagatgaaccgggcatcgaattccacaactttgcgcgcgcctccgac
ggcttgcgcgagcccgaattcaaccctgcgtatttcgaggcctggtgcagtggcaacacc
ggcttcccgatggtggacgcctgtatgcgctgcctcaacgcaaccggctggatcaacttt
cgcatgcgcgccatgctggtgagttttgccgcctatcacctctggttgcattggcgcgag
ccggggctgcatctggcgcggcagtttctcgatttcgagccaggcattcactggagccag
atgcaaatgcagtcgggcaccaccggcatcaacaccctgcgcgtgtattccccggccaag
cagcaggctgaccatgatccgcagggcgagttcatccgccagtgggtgccggagtggggg
acttcggcttatccgccgcccatcgtcaatgagcgcagcgccgtcaagcaggccaaagac
cgcatctacgccatccgccaaagcccgcaggcgagcgacgaggcgcgggcggtgcaacag
cggcacggctcgcgcgagagcggcctgccgcccagcggctcccgctcgcgcaagccggtt
gcgccacccgcgccaccgcgacagcaggagttgttcgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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