KEGG   Thiomonas intermedia: Tint_1107
Entry
Tint_1107         CDS       T01227                                 
Name
(GenBank) Uracil-DNA glycosylase superfamily
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
tin  Thiomonas intermedia
Pathway
tin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Tint_1107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tin03400]
    Tint_1107
Enzymes [BR:tin01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Tint_1107
DNA repair and recombination proteins [BR:tin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Tint_1107
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ADG30497
UniProt: D5WZT1
Position
1185949..1186632
AA seq 227 aa
MQGDDAPLSSSLFYDPHCRLCPRLAAFLHQVKQDHPDFACLPVPPLGPLDAPLLIAGLAP
GLKGANASGRPFTGDGAGPLLFGTLTELGLASRPVPVRIGDHPSTLRADDGLQLHGCRIS
NAVKCLPPENKPLPAEIRTCNRFIAAEITAMPNLRVIVALGKVAHDAVLMALGRKASSAR
FAHAAEHRLGDYMLIDSYHCSRYNQNTGRLTAPMFRAVFEQALHLVN
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcaaggtgacgacgcaccgctttcgagctcacttttttatgatccgcattgtcgtctg
tgcccacgactagcggcctttttacaccaagtcaaacaagatcatcccgattttgcctgt
ctgccggtgccgcctttggggccgctggatgcgccgctgctcatcgcgggcctggcgcca
ggcctgaagggggccaatgcctcggggcgcccgttcacgggagatggcgccgggccgctg
ctgttcggcacgctcaccgaactgggtctggcctcgcggcccgtacccgtgcggatcggc
gatcacccctcgacgctgcgggccgacgacggcctgcaactgcacggctgtcgcatcagc
aacgcggtgaaatgtctgccgcctgaaaacaagcccttgcccgcggagattcgcacctgc
aatcgattcatcgccgcagagatcacggccatgccgaatctgcgggtgatcgtcgctctg
ggcaaggtggcgcacgacgcggtgctcatggcgctggggcgcaaagcgtcatcggcccgc
ttcgcccatgccgcagagcatcgcttgggcgactatatgctgatcgacagctaccactgc
agccgctacaaccagaacaccggccgcttgaccgccccgatgtttcgcgcggtgttcgag
caggccttgcaccttgtgaactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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