KEGG   Thiomonas intermedia: Tint_1709
Entry
Tint_1709         CDS       T01227                                 
Name
(GenBank) DNA mismatch repair protein MutS domain protein
  KO
K03555  DNA mismatch repair protein MutS
Organism
tin  Thiomonas intermedia
Pathway
tin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Tint_1709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tin03400]
    Tint_1709
DNA repair and recombination proteins [BR:tin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     Tint_1709
SSDB
Motif
Pfam: MutS_V AAA_22 HTH_28 AAA_14
Other DBs
NCBI-ProteinID: ADG31079
UniProt: D5X1T3
Position
complement(1833756..1835372)
AA seq 538 aa
MSAAPAFHSIVHPSPEQEAAQSRPDLRDVFHDLFLEAIFMGAYGSFAPREKPSLYVVNQG
DDEAPYRAEVLALLQALFGTPLHELSVVQYRQAALRDLKQAPLLKGMRAFQRGMQELRAS
LRRAEKADYAAEGQRWFVDAALIYGHALQALHQTLAGAELQSQALQSLQGHVADLLASPA
HTERMKEAQALTQALAQVRYAFRVDGTAVTVLQDPQEPDYSATIAETFARFRQGEVKDYR
VQFNPASRLNHVEGQILDRVALLHPEVFERLAQFRSAQEGFADARIVRLDRELAWYLSWI
DYTQRLERAGLPLCFPTLHLEQGHIDAREAYDMALAWQCLDAQKPVVGNDMALQGDERML
VVTGPNHGGKTTLARTFGQLHHIASLGLTVAARSASLLLPDRIFTHFERVEDISNQRGKL
QDDLVRMHRILAAATPHSLVLMNEIFSSTTLDDALWLARHIMARLAAIGAACVFVTFLDE
LSTFDAHTVSMVGTVDAQDPTLRTFKVVRRAADGKSYALALAQKFGVTRQQLLDRIPA
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgtctgctgcaccggcgtttcacagcatcgtccatccctccccggagcaggaggccgcg
cagtctcgccccgatcttcgtgatgtgttccacgacctgttcttagaggcgattttcatg
ggggcttacggcagctttgccccgcgcgaaaaaccgtcgctctatgtggtcaatcaggga
gatgacgaagcgccgtatcgcgccgaggtgctggctttgctgcaggcgctgttcggcacg
cccttgcatgagctgagcgtggtgcagtaccgtcaggccgcgctacgcgacctgaaacaa
gcgccgctgctcaagggcatgcgggcgtttcagcgcggcatgcaagagttgcgcgcctcg
ctgcgtcgcgcagaaaaagcggattacgccgccgaggggcagcgctggtttgtggacgcc
gccttgatttacggccatgcgctgcaagccctgcatcagacgctggccggcgcggagctg
cagtcgcaggcgctgcaatccttgcagggtcatgtcgccgacttgctggcctcgcccgca
cacaccgagcgcatgaaggaagcgcaggctttgacccaagcgctggcgcaggtgcgctac
gcctttcgcgtggatggcaccgcagtcaccgtgctgcaagacccgcaagagcccgactac
agcgccaccattgccgagaccttcgcgcgctttcgccagggcgaggtcaaagactaccgt
gtgcagttcaacccggcttcgcggttgaaccatgtggaagggcagatcctcgaccgtgtc
gccctgctgcacccggaggtgttcgagcggctggcgcagtttcgcagcgcgcaggaaggg
tttgccgacgcgcgcatcgtgcggctggaccgcgagctggcctggtatctgtcctggatc
gattacacccagcgcctcgagcgcgccggactgccgctgtgttttcccaccctccacctc
gaacagggccatatcgacgcccgcgaggcctacgacatggcgctggcctggcaatgcctg
gatgcgcaaaagccggtggtgggcaacgacatggcgctgcagggtgacgagcgcatgctg
gtggtcaccggccccaaccacggcggcaagaccacgctggcgcgcaccttcggccagttg
caccacattgcctcgctgggtttgaccgtggccgcgcgcagcgccagcctgttgctgccc
gaccgcatcttcacccacttcgagcgggtcgaagacatcagcaatcagcgcggcaagctg
caggacgatttggtgcgcatgcaccgcattctggccgcggccacgccgcacagcctggtg
ctgatgaacgagatcttttcgtccaccacgcttgatgatgcgctctggctggcgcggcac
atcatggcgcggctcgcggccattggcgcggcttgcgtgttcgtcacctttctcgacgaa
ctctccacctttgatgcgcacaccgtgagcatggtcggcacagtcgatgcccaagacccg
accctgcgcaccttcaaagtggtgcggcgcgccgccgacggcaagtcttacgcgctggcg
ctggcgcagaaattcggtgtcacccggcagcaactgctcgatcgcattcccgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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