KEGG   Thermoanaerobacter italicus: Thit_1192
Entry
Thit_1192         CDS       T01178                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
tit  Thermoanaerobacter italicus
Pathway
tit03030  DNA replication
tit03430  Mismatch repair
tit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Thit_1192
   03430 Mismatch repair
    Thit_1192
   03440 Homologous recombination
    Thit_1192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tit03032]
    Thit_1192
   03400 DNA repair and recombination proteins [BR:tit03400]
    Thit_1192
Enzymes [BR:tit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Thit_1192
DNA replication proteins [BR:tit03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Thit_1192
DNA repair and recombination proteins [BR:tit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Thit_1192
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 DNA_pol3_a_NII tRNA_anti-codon RNase_H_2 DEDDh_C Rv2179c-like HHH_3 Radical_SAM tRNA_anti_2 DNA_pol3_a_NI GIDA_C CSD
Other DBs
NCBI-ProteinID: ADD02456
UniProt: D3T2K4
Position
complement(1225686..1229906)
AA seq 1406 aa
MIPALFLQEFEIKKVKLLKKERKLIVSVSSNNNANSQFRKFQDFLLNKFPLIKEVEVVVE
REEKYNCLQDIIDNFEEIILKLSEEHPASLGFLKTCEVVAEDQKIIIKAPNEVVYQFIKS
NRIDYALRKFLKDKYGIETEINVILLQELQDTMGKIIREEDIKVIEEITKNGHKQQDVNT
TEREDKGHSQILLGKEIKAEAISIKNITAEIEEAIIEGEIFSLEFKELKSKILMTFDITD
YTSSILVKAFLTEEKYNSLKENIQVGSFIKLRGKVFYDKYEGDLVISLKDLQLISPKERK
DLGEKKRVELHLHTQMSSMDAVASATEVIKRAAKWGHKAIAITDHAVVQAYPEAMEASYK
YGVKVIYGVEGYLVDDGVPIVMGDTDSTLDDEFTVFDIETTGLSNINDEIIEIGAVKIKE
GKIIDTFETFVNPKIPISSFITKLTGIDESMVKDAPSIEEILPKFLEFSSNSVLVAHNAN
FDVSFIKSKAKKFNLNVNNTVLDTLELSRHLYKDLKNYKLDTLAEHLQVKLEHHHRAVDD
ARATAEIFIKTIDRLKELGVKKVKDINDILRESEVDIKKLPVYHVTILVKDQRGLRNLYE
IISKSNLEYFHRTPRIPKSLLISMREGLIIGSACEQGEVFRAILSNLEEKKLENIISFYD
YLEVQPVGNNEFLIEKGEVKSVEELKEINRRIYLLGKKYNKLVVATGDVHFLDPWDDIYR
KILMAGKGYKDADRQPPLYFKTTDEMLKEFEYLGEEVAKEIVIDNPNKIADLIEEVKPIP
DGTFPPVIEGAEEELRKLTLDKAHEIYGDPLPEIVQNRLDRELNSIINNGYAVMYIIAQK
LVSKSLKDGYLVGSRGSVGSSLVATMSGITEVNPLPPHYVCPNCKYSEFITDGSYGCGVD
MPDKICPHCGTLMKKDGFDIPFEVFLGFEGDKEPDIDLNFSGEYQPIAHKYTEELFGKGH
VFRAGTIGTLADKTAYGFVKKYFEERSLVVHKSEIKRLTMGCTGVKRTTGQHPGGIMVVP
KDKSIYDFTPIQHPADAEDTDVITTHFDYHSISGRLLKLDILGHDDPTVIRMLEDLTGVN
AREIPLDDKKTMSLFTSVEALGIDPEELNTPVGTLGLPEFGTKFVRQMLIETRPTTFAEL
VRISGLSHGTDVWLNNAQDIIREGIATLKEVISTRDDIMLYLISKGMDKKLSFKIMENVR
KGKGVTPEEIEEMKKHGVPNWFIESCQKIKYMFPKAHAVAYVIMAFRIAYFKVHYPEAFY
ATYFTVRADDFNLDIVLKGRDSIKNAIKEIEAKGNNASPKEKSLLTVLEVALEMYLRGFK
FINVDLYKSDAVKFLITNEGILPPLNSLEGVGIQAAKTIAQERENGKFLSVEDFRNRTKV
SKTVIEILRKYGCLNDLPESNQLSLF
NT seq 4221 nt   +upstreamnt  +downstreamnt
atgattccagcattatttctgcaggaatttgaaataaaaaaagtaaaactgttaaaaaaa
gagagaaaattaattgtaagtgtatcctctaacaataatgcaaattcacagtttagaaaa
tttcaggattttttgcttaacaaatttcctttgattaaagaagtggaagttgtagtagaa
agggaagagaaatataattgccttcaggacataatagataattttgaagaaataatttta
aaactgagtgaagaacatccggcttctcttggttttttaaaaacttgtgaggtagtagca
gaagatcaaaagataataattaaagctcctaatgaagtagtctaccaatttataaagagc
aatagaattgactatgctcttaggaaatttttaaaggataaatatggaattgaaacagaa
ataaatgtgatccttttacaggaactccaagacacaatggggaaaatcataagggaggaa
gatataaaagttattgaagaaattactaaaaatggtcataaacaacaagatgtcaataca
actgaaagggaggacaaaggacattcccaaatacttttaggaaaagaaataaaagctgaa
gcgatatctattaaaaatattactgcagaaatagaagaagcaataattgaaggtgaaatc
ttttctctcgaatttaaggaattaaaatctaaaattttaatgacttttgatataactgat
tatacttcatcaatacttgtaaaagcctttttaactgaggaaaagtataattctttaaaa
gagaatatccaagtaggcagttttataaagttaagggggaaagttttctacgataaatat
gaaggagatttagtaataagtttaaaagacctgcagctgatatccccaaaagagagaaaa
gatctaggtgagaaaaaaagagtagagcttcacttacacactcaaatgagcagtatggat
gcggtagcctctgcaacagaagtgattaaaagagcagcaaaatggggacacaaagctatt
gctataacagaccatgcagttgtacaggcatatccagaagcgatggaagcctcctataaa
tatggagtaaaagtcatatacggtgtagaaggctatttagtggatgatggtgtacctatt
gtaatgggagatacagactctaccttagatgatgagtttactgtttttgatatagagacg
actggtctttccaatataaatgatgaaataatcgaaattggtgcagtaaaaataaaagaa
ggcaaaataatagatacttttgaaacctttgttaatcccaaaattcctatttcttctttt
ataaccaaacttactggaattgacgaatctatggttaaagatgctccttctatagaagaa
atattacctaaatttttggagttttcttctaacagtgttttagtggctcataatgcaaat
tttgatgtgtcttttataaaatctaaagctaaaaaatttaatttaaatgtgaacaatacg
gttttagataccttagaactaagtaggcatttatataaagatttgaaaaattacaaacta
gatactttggctgaacacttacaggtaaaactggaacaccaccacagagcggtagacgat
gccagagctactgctgaaatatttataaaaactatcgatagattaaaagaattaggagta
aaaaaggtgaaagatataaatgatatattgagagaaagtgaagttgatataaagaaattg
cctgtctaccatgttacaattttggtaaaagaccaaagaggattgagaaatttatacgaa
ataatctctaaatctaatttagaatatttccatagaacacctcgtatccccaaaagttta
cttattagtatgagagaaggtcttatcattggttctgcttgcgaacaaggggaagttttt
agggcgattttatctaatttagaggaaaagaaactagagaatattatttctttttacgat
tatttagaagtacaacctgtgggaaataatgagtttttaattgaaaaaggagaagtaaaa
agcgtagaagaattaaaagaaataaatagaagaatttatcttttaggtaaaaaatacaat
aaattagtggtagcaacgggagatgtacactttttagatccgtgggatgatatatacaga
aaaattttaatggcaggaaaaggatataaggatgcagataggcagccgcctctttatttt
aaaacaaccgatgagatgctaaaagaatttgaatatttaggagaagaagtagcgaaagag
attgtaattgataatcctaataaaattgctgaccttatagaagaagtaaaacccatacca
gatggaacattccctcccgtaatagaaggagctgaagaagaattaaggaagcttacttta
gataaggctcatgaaatatacggcgaccccttgccagaaatagtacaaaatcgcttggat
agagaattaaattctataattaacaatggatatgcagtcatgtatattatagctcagaaa
ttagtgtctaagtctttaaaagatgggtatttggttggctctagaggttctgtaggctct
tctttagtggctactatgagtggaataacagaagttaatccactgcctcctcattatgtt
tgtccaaattgcaagtattccgagtttataactgatggaagctatggttgtggtgtggac
atgccggacaaaatttgtcctcactgtggtactttgatgaagaaggatggctttgatata
ccctttgaagtgtttttagggtttgaaggagataaagaacccgatattgacctcaatttt
tctggagaataccaacctattgctcataagtatacagaagaactttttggaaaaggacac
gtttttagagcaggtactattggaactttagcagataaaactgcttatggatttgtgaaa
aaatattttgaagaacgtagtttagtagttcataagtcagaaatcaaaaggcttactatg
ggatgcacaggggtaaaaagaactacaggacaacatccaggtggaataatggtagtgcca
aaggacaagagcatttacgactttactccaatacagcatcctgcagatgcagaagacact
gatgttataacgactcattttgattaccattcaataagcggaaggcttttaaaactggat
attttagggcatgatgaccctacagttatcagaatgcttgaagatttaaccggcgttaat
gcaagagagattcctttggatgataagaaaactatgagcttattcaccagcgtagaagca
ttgggaatagaccctgaagaactaaatactcctgtgggtactttgggattgcctgagttc
ggaacgaagtttgtaagacagatgcttattgagactcgtcctactacttttgcagaacta
gtacgcataagcggactttctcacggcactgatgtatggcttaacaatgctcaggacata
ataagagaaggaatagctacattaaaagaagtaatatctacaagagatgatataatgctt
tatctgataagcaaaggtatggataaaaaattatccttcaaaataatggaaaatgtaaga
aagggcaaaggtgtgacgccagaagaaatagaggaaatgaaaaaacacggtgttccaaat
tggtttattgagtcttgccaaaaaataaaatatatgtttcctaaagcccatgctgtggca
tatgtaataatggcatttcgaattgcttattttaaagttcattatccagaagccttttat
gctacatactttactgttagagcagatgactttaatttggatattgtattaaaagggaga
gacagcataaaaaatgctataaaagagatagaagcgaaaggaaataatgctagtcctaaa
gaaaaaagccttttaacagtattagaagtagctttagagatgtatctaagaggatttaag
tttataaatgtagacttatataaatctgatgcagtcaaatttttgattactaatgaagga
atattgccacctcttaattctttagaaggtgtaggaatacaagcggccaaaacaattgca
caagaaagagaaaatggtaaatttctatctgttgaagattttagaaacagaacaaaggtc
agtaaaacagttatagaaatattaagaaaatatggctgcttaaatgatttgccagaatct
aatcaattaagtttattttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (29)   

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