KEGG   Tenacibaculum jejuense: TJEJU_0761
Entry
TJEJU_0761        CDS       T05041                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
tje  Tenacibaculum jejuense
Pathway
tje03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tje00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TJEJU_0761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tje03019]
    TJEJU_0761
Enzymes [BR:tje01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     TJEJU_0761
Messenger RNA biogenesis [BR:tje03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TJEJU_0761
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 Helicase_C_2 FMN_dh
Other DBs
NCBI-ProteinID: SNR14533
UniProt: A0A238U5Q3
Position
TJEJU:787208..788563
AA seq 451 aa
MTAFEDLDLSNPLRNSIADLGFSHPTPIQVEAFPVVRSGNDVVGIAQTGTGKTFAYILPI
LRDLKFSKQLNPRVLILVPTRELVLQVVEEIEKLAKYITLRVLGVYGGVNLNRHKQAVAE
GCDIIVATPGRLYDLAVSKVLKLKSIQKLVIDEVDVMLDLGFRFQILNIFDLLPVRRQNI
MFSATMTEDVEALIDDFFIAPKKIAIAVSGTPLDNIEQSAYEVPNFYTKINLINYLLFDK
NEFHKVLIFAPNKRNADRIFNLLEEEFPGHNCVIHSNKTQNYRIKSIENFNEGKHRILIA
TDVIARGLDLQEISHVINFNPTQYAENYMHRIGRTGRAEHKGKSILLSTPKEQEAKTRIE
ELMNYEIPKLAIPEQVEISNQLTEEERPKEDKSQSNNRTSQEYVPGPAFHEKKDKNKKVN
LGGSYRREIAKKYKKPKTRGDKNFNKRNKKK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgacagctttcgaagatttagatttatcaaatccactaagaaactcaatagccgatttg
ggtttttctcatcccacacctattcaggtagaagcctttccagtagtaaggtcaggaaac
gatgttgttggaatagctcaaacaggtacaggaaaaacgtttgcctatattttaccaatt
ttaagagatttaaaattctcaaagcagctaaatccaagagttttaattttagtgccaact
cgcgaacttgttttacaggttgtagaagagatagaaaaactagctaaatatattacatta
agagttttaggagtttacggaggtgtgaatttaaatagacacaagcaagcagttgccgaa
ggatgcgatattattgttgctactccaggtagattatatgatttagctgttagtaaggtt
ttaaagttaaaatcaattcagaaattagtaattgatgaagtagatgtaatgttagattta
ggatttagatttcaaatcctaaatatttttgatctactacctgttagaagacaaaatatt
atgttttcggcgacgatgaccgaagatgttgaagctttaattgatgatttctttattgca
ccaaaaaagattgccatagctgtaagtggaacaccgttagataatatagaacagtctgct
tatgaagttcctaatttttataccaagattaacctaattaattacttactttttgataag
aatgagtttcataaagttttaatatttgcacctaataaaagaaatgcagatcgtattttt
aacttattagaagaagaatttcctggacacaactgtgtaatccattcaaataagactcaa
aactatagaattaagtctatagaaaactttaatgaaggaaaacatagaattttaatagca
acagatgtaattgctcgaggtttagatttacaagagatttcgcatgtaattaattttaat
ccaactcaatatgcagaaaattacatgcatagaattggtagaacaggtagagcagagcat
aaaggtaaatctattttgctaagtactcctaaagagcaagaggcgaaaactaggattgaa
gaattgatgaattatgagattcctaaactagcgattccagaacaggttgagatttctaat
caattgacagaagaagaaagacctaaagaagataaatctcaatctaataacagaacgtca
caagagtacgttcctgggccagctttccatgaaaagaaggataaaaataaaaaagtaaac
ctaggaggtagttatcgaagagagattgcaaaaaaatacaagaaacctaaaacaagagga
gacaagaatttcaataaaagaaataaaaagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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