KEGG   Tenacibaculum jejuense: TJEJU_4024
Entry
TJEJU_4024        CDS       T05041                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
tje  Tenacibaculum jejuense
Brite
KEGG Orthology (KO) [BR:tje00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tje03032]
    TJEJU_4024
   03036 Chromosome and associated proteins [BR:tje03036]
    TJEJU_4024
   03400 DNA repair and recombination proteins [BR:tje03400]
    TJEJU_4024
DNA replication proteins [BR:tje03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    TJEJU_4024
Chromosome and associated proteins [BR:tje03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    TJEJU_4024
DNA repair and recombination proteins [BR:tje03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      TJEJU_4024
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg divDNApol Arteri_nsp7a PqqD
Other DBs
NCBI-ProteinID: SNR17651
UniProt: A0A238UER7
Position
TJEJU:4483439..4483729
AA seq 96 aa
MTKADIVSKISDKTGIEKADVLATVEAFMSEVKDSLESGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKTFTEGVKAKVAVK
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacaaaagcagatatcgtatcgaagatttcagacaagacagggatagagaaggcagat
gtattagcgactgtagaggcatttatgtctgaggttaaagattctttagagagtggagat
aatgtatatttaagaggttttggaagctttatcatcaaaacaagagctgaaaaaacaggt
agaaatatttctaaaaacactacaattaaaattcctgcacacaacattccagctttcaag
cctgctaagactttcacagaaggtgtaaaagctaaagttgcagtaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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