KEGG   Thioalkalivibrio sp. K90mix: TK90_0673
Entry
TK90_0673         CDS       T01174                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
tkm  Thioalkalivibrio sp. K90mix
Pathway
tkm00061  Fatty acid biosynthesis
tkm00071  Fatty acid degradation
tkm01100  Metabolic pathways
tkm01212  Fatty acid metabolism
tkm02024  Quorum sensing
Module
tkm_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:tkm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    TK90_0673
   00071 Fatty acid degradation
    TK90_0673
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TK90_0673
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:tkm01004]
    TK90_0673
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tkm04147]
    TK90_0673
Enzymes [BR:tkm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     TK90_0673
Lipid biosynthesis proteins [BR:tkm01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   TK90_0673
Exosome [BR:tkm04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   TK90_0673
  Exosomal proteins of breast cancer cells
   TK90_0673
SSDB
Motif
Pfam: AMP-binding Lentiviral_Tat DDE_Tnp_ISL3
Other DBs
NCBI-ProteinID: ADC71188
UniProt: D3SFF8
Position
complement(716618..718426)
AA seq 602 aa
MSDSAIRPDQAPTLPSLFRVRVEQTPDAPAYRHYNTAREAWQQTSWREMGAMVDRWQAAL
AAEGLKPGERVALMLGNSREWVAFDQAAMGLGLVPVPLYTDDRPDNVAYIIGQTQARILL
LGESAHSRRLSEHFENMPSLRRIVNIGGEDTEPDDDRVTELEDWLTRHEATEFHHPDLDP
EAMATIVYTSGTTGRPKGVILSHRNILENAWASSQAGPLSPADRFLSFLPLSHMLERTAG
LYMPMLIGAEVAFARSIQALGEDLVNVRPTVLISVPRIYERVHGRIQAGLKQKSGLGRAL
FKATVSIGWKRFEHQQGRGGWSPGFLLWPVLERIVARKVLDRLGGELRFAVCGGAPLPPP
IAQFFIGLGLPVLHGYGMTEASPVVTVNTPDDNLPASIGKPLPGVEIRIGEMDELLTRSP
CVMLGYWKNEEATRETIDEDGWLHSGDQARIDDSGHVFITGRIKDILVLTNGEKVPPADM
EMAIALDALFDQVMIVGDNRSFLTALVVPEPEAWASFASDHDLDAETEGRLPRKAERALL
QRIQYQLRDFPGYAKIRHVHVTHEAWSVDNGMLTPTMKLKRPVIVEHYSEAIEAMYAGHD
GR
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgtccgattccgcgatccgtcccgaccaggccccgaccctcccctcgctgttccgtgtc
cgtgtcgaacagacaccggatgccccggcctaccgccactacaacaccgcgcgcgaggcg
tggcagcagacctcctggcgcgagatgggcgcgatggtggatcgctggcaggccgcactg
gccgcggagggcctcaagcccggcgagcgtgtcgcattgatgctcggcaactcgcgcgag
tgggtcgcgttcgaccaggcggcgatggggctggggctggtcccggtcccgctgtacacc
gacgatcgtccggacaacgtcgcctacatcatcggccagacgcaggcacgcatcctgctg
ctgggcgagagcgcccacagccgccggctgtccgagcacttcgagaacatgccgtcgctg
cggcgcatcgtgaacatcggcggcgaggacacggagccggacgacgaccgcgtgaccgag
ctggaagactggctcacgcggcacgaagccaccgaattccaccacccggacctcgatccg
gaggccatggccacgatcgtctatacgtccggcaccaccgggcgccccaagggcgtaatc
ctctcgcaccgcaacatcctggagaacgcctgggcctcctcgcaggccggcccgctgtcg
cccgccgaccggtttctgtcgttcctgccgctgtcgcacatgctggaacgcaccgccggg
ctgtacatgcccatgctgatcggtgccgaggtcgccttcgcgcgctccattcaggccctg
ggagaggacctggtcaacgtgcgccccaccgtgctgatctcggtgccgcgcatctacgaa
cgcgtacatggccgcatccaggcggggctaaaacagaaatcgggcctcggccgcgccctg
ttcaaggcaaccgtcagcatcggctggaagcgcttcgagcaccagcagggccggggcggc
tggtcccccggtttcctgctctggcccgtactggagcgcattgtcgcgcgcaaggtgctg
gaccgcctgggcggcgagctacgcttcgcggtctgcggcggcgctcccctgcccccacca
atcgcccagttcttcatcggcctgggcctgccggtactgcacggatacggaatgaccgag
gccagcccggtggtcaccgtgaacaccccggacgacaacctccccgcctcgatcggcaag
ccgctgcccggagtggaaatcaggatcggcgagatggacgaactgctcacccgcagccct
tgcgtgatgctcggctactggaagaacgaggaggccacccgcgagaccatcgacgaagac
ggctggctgcacagtggcgaccaggcccgcatcgacgacagcgggcatgtattcatcacc
gggcgcatcaaggacatcctggtgctgaccaacggcgagaaggtcccgccggccgacatg
gagatggcgatcgcgctggatgcgctgttcgaccaggtgatgatcgtgggcgacaaccgc
tccttcctgaccgcgctggtcgtgccggagccggaggcctgggcctcttttgccagcgac
catgacctcgacgccgagaccgagggccggctgccacgcaaggccgaacgcgccctgctg
cagcgcatccagtatcagctacgcgacttccccggctacgccaagatccgccatgtgcat
gtgacccacgaggcctggtccgtggacaacggcatgctgaccccgaccatgaagctcaag
cgcccggtgatcgtcgagcactacagcgaggccatcgaggcgatgtacgccggccacgac
ggtcgctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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